Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0944 ATGAGTTCAGTTTATGAATTAGTATTATTGCTTTTATTTTGTGGCCTTTTGCCACTTGTCTTGGCGGCTGGGAACCAAGCAGAGTGTCCACCTTCGTTTCCATGTGGATATCTGAGCAATATCAGTTTCCCATTCACTCTAACTGAACGCCCCGACTGTGGCTTATTGCCCATTAGCAATTGTGATGATCCACTTAAGCCCATAATGATCCAATTACACAAAATTGGACTATGGTTTCAGCTTCTACGCGTTGCTCAGCTTTTCAGTAGTCCTACTACTCCTCTCACATCTTTTCAATTTAGAGACAAAAATCTCTATGACCTTCTGCAGAACGAAAGTTGTGAAGCTTTCAGAAACAATTATACTCTTCCATTTCCTCACAGCTTTCACTTTGCTTCTTTTCATTTCCAATACAACACAACTCTGTTCAGGTGCAACCGCAGCCTCCATGTCAGCCCTCCCACAAACATGCATAATTATACAAAGTGCCCCGATTACGATCTCTACTACAATAACAACCCCAAAGCTGAAGATGCGTCTTTGAGAGCATGTACAAAGGTCCTGCTTCCAATTAAAGACGCGCCTGACGCTAACAACCCATTCACATTCGCAACTGCAGATATCTTCACTAAAGTAGAATTAACCGATGAATGTGCAGCTTGCCACTATCGCAGAGGAGGGCAGTGTCAACTTGACAGCAGAGAGATATTTTTTTGTGCCACTGCCAATAGTATCGCTGTTACAATTGCTCTGTTGCTAGTAATGGTAAAGATCTACCATACAAGATGGAAGAAGCAAAATCCGACCAATCAACAGATTAGGATCTTTTTGGAAAGAGAGGGACCCCTTCAAACTAAGCGGTATGATTATTCTGAGATAAAGAAAGTGACCAACTCCTTCAGAAACAAATTAGGCCAAGGGGGATTCGGAAGTGTATACAAAGGAAAATTACCAGATGGACGTTATGTTGCGGTGAAGATCCTATGTGAATTGAAAGATAATGGTGAGGACTTCATCAATGAAGTGGCAACTATCAGCAGAACTTCTCATATTAACATTGTTAATCTTTTGGGGTTCTGTTCTGAAGGTTCTAAACGAGCTTTAGTTTATGAGTTTATGTCTAATGGATCACTTGAGAAGTTTATCTTTGAAGAAAATGTCATAAAGACGGATCGTCAATTGGACTGTCAAACGATCTACCATATTGCAATTGGTGTTGCCCGAGGACTAGAATACCTGCATCAAGGTTGCAATACTAGAATTTTACATTTTGACATAAAACCTCATAATATTCTGTTGGATGAGAATTTCAACCCCAAGATTTCTGACTTTGGACTAGCCAAAATTTGCACAAGAAAAGAAAGTATGATATCAATATTTGGCGCCAGAGGAACAGCAGGCTATATTGCCCCAGAAGTTTTTTCAAGAAATTTCGGTACAGTATCACATAAGTCAGATGTGTACAGCTATGGAATGATGATCTTAGAAATGGTTGGAAGAAGAAAGAATATTAAGACTGAAGTAAATTGCTCGAGTGAAATATACTTTCCCGATTGGATTTACAATCGCCTTGAATCAAATGAAGAGCTTGGTTTACAGAACATAAGAAATGAAAGTGATGACAAATTGGTGAGAAAGATGACAATAGTGGGCTTATGGTGCATACAAACCCACCCTTCCACTCGACCAGCCATAAGTAAAGTGTTGGAAATGCTAGGAAGCAAAGTTGAGTTATTGCAAATTCCACCCAAACCCTTTTTGTCTTCTCCTCCGACCTCTCCAGTCCATTTATCTTGTGAGACTTTGTAA 1809 0.3975 MSSVYELVLLLLFCGLLPLVLAAGNQAECPPSFPCGYLSNISFPFTLTERPDCGLLPISNCDDPLKPIMIQLHKIGLWFQLLRVAQLFSSPTTPLTSFQFRDKNLYDLLQNESCEAFRNNYTLPFPHSFHFASFHFQYNTTLFRCNRSLHVSPPTNMHNYTKCPDYDLYYNNNPKAEDASLRACTKVLLPIKDAPDANNPFTFATADIFTKVELTDECAACHYRRGGQCQLDSREIFFCATANSIAVTIALLLVMVKIYHTRWKKQNPTNQQIRIFLEREGPLQTKRYDYSEIKKVTNSFRNKLGQGGFGSVYKGKLPDGRYVAVKILCELKDNGEDFINEVATISRTSHINIVNLLGFCSEGSKRALVYEFMSNGSLEKFIFEENVIKTDRQLDCQTIYHIAIGVARGLEYLHQGCNTRILHFDIKPHNILLDENFNPKISDFGLAKICTRKESMISIFGARGTAGYIAPEVFSRNFGTVSHKSDVYSYGMMILEMVGRRKNIKTEVNCSSEIYFPDWIYNRLESNEELGLQNIRNESDDKLVRKMTIVGLWCIQTHPSTRPAISKVLEMLGSKVELLQIPPKPFLSSPPTSPVHLSCETL* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0944 602 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 1 600 - -
Gso20g0944 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Gso20g0944 602 Gene3D Transferase(Phosphotransferase) domain 1 373 585 - -
Gso20g0944 602 ProSiteProfiles Protein kinase domain profile. 298 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g0944 602 Pfam Protein kinase domain 302 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g0944 602 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 600 IPR045874 GO:0004672
Gso20g0944 602 SUPERFAMILY Protein kinase-like (PK-like) 280 572 IPR011009 -
Gso20g0944 602 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Gso20g0944 602 Gene3D Phosphorylase Kinase; domain 1 277 372 - -
Gso20g0944 602 SMART serkin_6 298 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0944 Gso-Chr20 39127314 39130265 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0944 245 587 Receptor kinase-like Gene Family AT4G18250 54.416 7.38e-128 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gso20g0944 Pkinase 2.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0944 - - gmx:100786495 1162.13