Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0935 ATGGGGATGGGTTCTAAAATGGAAGGACCGTCTACCCCAGCAATTCGACGTGACCCATACGAGGTATTGTCCGTGTCGAAAGACTCAACCGATCAAGAAATTAAAACGGCTTACAGAAAGCTTGCTCTTAAGTATCACCCTGATAAGAATGCTAGCAATCCTGAAGCTTCGGAGCTATTTAAAGAGGTTGCATATTCTTATAGTATCTTGTCTGACCCAGAAAAGAGAAGGCAGTATGACAGTGCTGGATTTGAGGCACTTGATGCTGATAGCATGGACATGGAAATTGATTTATCTAATCTTGGGACTGTGAACACAATGTTTGCAGCTTTATTCAGCAAACTGGGTGTCCCTATCAAGACTACCATTTCAGCTAATGTTCTTGAAGAAGCTCTGAATGGAACAGTTACAGTCAGACCCCTTCCAATTGGATCATCAGTCAGTGGAAAGGTAGAGAAGCAATGTGCTCATTTCTTTGGTGTGACAATAAATGAGCAGCAAGCTGAGTCAGGCATTGTAGTAAGAGTTACTTCAACTGCACAAAGCAAATTTAAGTTGCTCTACTTTGAACAAGATGCGAATGGAGGCTATGGTTTGGCATTGCAGGAAGACAGTGAGAAGACTGGCAAGGTGACATCTGCAGGAATGTATTTCTTACATTTTCAAGTGTATAGAATGGATTCAACGGTGAATGCGTTAGCGATGGCCAAGGATCCTGAAGGGGCCTTTTTTAAAAGATTGGAAGGTCTTCAACCTTGTGAAGTCTCGGAACTAAAGCCTGGCACTCATATCTTCGCTGTTTATGGAGATAACTTCTTTAAGACTGCTAGCTATATGATTGAGGCAGTATGTGCAAAATCATATGAAGATACCACCCAAAAACTGAAGGACAATGAAGCTCAAATTTTAAGAAAGAGGAATGAGCTACGCCAATTTGAAGCAGAATATAGAAAGGCATTGGCACGCTATCAGGAAGTGACAGACAGATACACAAAAGAAAAACAATCTGTAGATGAGCTTCTGAAACAAAGGGATGGTATCCATTCTTCTTTCACCACTGTGAAGTCAACCAATTTTAGTGGAAGTGGTAGTAATTTAAGCAATGGAAGTTCTAGCAAAATTAATGGCGACGAGAGCCCCGGGGAAGATGGAGGGTCAGATGGCAAGGATAAATCAGGCAAAAAGAAATGGTTTAATTTGAATCTTAGGGGTTCTGATAAGAAGTTGATTTAA 1233 0.4104 MGMGSKMEGPSTPAIRRDPYEVLSVSKDSTDQEIKTAYRKLALKYHPDKNASNPEASELFKEVAYSYSILSDPEKRRQYDSAGFEALDADSMDMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGSSVSGKVEKQCAHFFGVTINEQQAESGIVVRVTSTAQSKFKLLYFEQDANGGYGLALQEDSEKTGKVTSAGMYFLHFQVYRMDSTVNALAMAKDPEGAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTASYMIEAVCAKSYEDTTQKLKDNEAQILRKRNELRQFEAEYRKALARYQEVTDRYTKEKQSVDELLKQRDGIHSSFTTVKSTNFSGSGSNLSNGSSSKINGDESPGEDGGSDGKDKSGKKKWFNLNLRGSDKKLI* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0935 410 ProSiteProfiles dnaJ domain profile. 18 83 IPR001623 -
Gso20g0935 410 MobiDBLite consensus disorder prediction 1 30 - -
Gso20g0935 410 CDD DnaJ 18 72 IPR001623 -
Gso20g0935 410 MobiDBLite consensus disorder prediction 361 377 - -
Gso20g0935 410 Pfam DnaJ domain 18 80 IPR001623 -
Gso20g0935 410 Coils Coil 288 343 - -
Gso20g0935 410 SUPERFAMILY Chaperone J-domain 17 88 IPR036869 -
Gso20g0935 410 PANTHER CHAPERONE PROTEIN DNAJ 15-LIKE 4 408 - -
Gso20g0935 410 MobiDBLite consensus disorder prediction 380 410 - -
Gso20g0935 410 MobiDBLite consensus disorder prediction 361 410 - -
Gso20g0935 410 PRINTS DnaJ domain signature 20 38 IPR001623 -
Gso20g0935 410 PRINTS DnaJ domain signature 38 53 IPR001623 -
Gso20g0935 410 PRINTS DnaJ domain signature 55 75 IPR001623 -
Gso20g0935 410 PRINTS DnaJ domain signature 75 94 IPR001623 -
Gso20g0935 410 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 4 408 - -
Gso20g0935 410 SMART dnaj_3 17 75 IPR001623 -
Gso20g0935 410 ProSitePatterns Nt-dnaJ domain signature. 60 79 IPR018253 -
Gso20g0935 410 Gene3D DnaJ domain 5 100 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0935 Gso-Chr20 39035840 39049402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0935 11 90 C2H2 Transcription Factor Family AT1G74250 43.529 2.14e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0935 - - gmx:100777978 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0935 20 39035840 39049402 Gso10g2411 10 51029459 51035246 GST