Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0934 ATGGAAACCACCCAGCTTGACTACAACACTAAAAGAGCAAACCCCACTTCCCCAACGCGCTTGAAGCTCTTCGGTTTCAGCGTACACCACGAAGACATCATGGAAGAGGACGAGGTGGTGGTGGCGCATGATGACGTGGCGGACTCCACCACCAAGGCTACTTCCACATCCCCTTCCCCGTCTGACTCGCCGGACTCCTCCGTCGCCGCTGCCGGACCTCCTTCCTCCGGCGACCGGAAATACGAGTGCCAATACTGCTGCCGAGAGTTCGCGAATTCACAAGCACTTGGCGGACACCAGAACGCGCATAAGAAGGAGCGTCAGCAGCTGAAGCGCGCGCAGTTACAGGCCTCTCGAAACGCAGCCGTTTCGTTCGTGCGGAACCCGATGATCTCCGCCTTCGCCCCTCCGCCGCACCTGCTGGCTCCGCCGGGCTCCGTCATGGTCTCGGCGGCACCTCCCTCGTGGGTGTACATGCCGCCACGTGCCGCGCCTCCTCCCTTCCACGTGTCAGTGTCGCACGGTTGCGCGTTCCCGTCGGCGCATGGCAACAACAACGGCTTCAGCGGTGGCAGCAGCAGTAATAGTAATAACGTGACCATAACAACGGGTGTGAAATCTGCGGGTGCAGGGATGTTTCCCTATGTTGGCGTTGTAGGAGATTCCTCATTAGCTGCTTTGTCAACGGTGCAGGTTCAGGCCCGGGCCCACCATGCTAGGATTGATGGGCCCTCTTTGAGTAGGTTTTCCAAAGGTGACGGTGGGCCCAAATTTGATGATGCATGGGGTTTGGACTTGCACCTTAGTCTTGCGCCGGCTGCGCCGCCATCTCTCGGCTCGGCTTGA 846 0.5946 METTQLDYNTKRANPTSPTRLKLFGFSVHHEDIMEEDEVVVAHDDVADSTTKATSTSPSPSDSPDSSVAAAGPPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQASRNAAVSFVRNPMISAFAPPPHLLAPPGSVMVSAAPPSWVYMPPRAAPPPFHVSVSHGCAFPSAHGNNNGFSGGSSSNSNNVTITTGVKSAGAGMFPYVGVVGDSSLAALSTVQVQARAHHARIDGPSLSRFSKGDGGPKFDDAWGLDLHLSLAPAAPPSLGSA* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0934 281 MobiDBLite consensus disorder prediction 37 76 - -
Gso20g0934 281 ProSitePatterns Zinc finger C2H2 type domain signature. 83 103 IPR013087 -
Gso20g0934 281 Gene3D Classic Zinc Finger 63 128 - -
Gso20g0934 281 PANTHER ZINC FINGER PROTEIN GIS3 12 275 - -
Gso20g0934 281 SUPERFAMILY beta-beta-alpha zinc fingers 77 108 IPR036236 -
Gso20g0934 281 MobiDBLite consensus disorder prediction 48 70 - -
Gso20g0934 281 ProSiteProfiles Zinc finger C2H2 type domain profile. 81 108 IPR013087 -
Gso20g0934 281 PANTHER ZINC FINGER PROTEIN 5 12 275 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0934 Gso-Chr20 39020632 39021832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0934 5 274 C2H2 Transcription Factor Family AT1G68360 42.160 3.01e-53 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0934 - - gmx:102663095 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0934 20 39020632 39021832 Gso10g2413 10 51060192 51061324 GST