Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0923 ATGAGACTTTCCATTCTGCAACCCCACCCCCACCCCCACCGGATAAAGCGCTGGCCCCGCATCGACGCGTCGTCCTTCCACCGCCGCAAGGACAAGGTGGTGGTGATCATGGGCGCCACCGGCTCTGGCAAGTCCCGTCTCTCCATCGACCTTGCAACCCTCTTCCCCTCCTCCGAAATCATCAACTCCGACAAAATGCAAGTCTATCGCGGCCTCGACATCACCACCAACAAGATCCCCCCCGCCCAGCGCCGCGGCGTCCCCCACCACCTCCTCGGAGACGTCGACACCGACCACCACGGCGAGTTTTCCCCCGCCGACTTCCGTCACCGCGCCGCCGACCTCATCGCCGACATCACTCGCCGCAAAAACCTCCCCATCGTCGTCGGCGGCTCCAACTCCTTCGTCCACGCCCTCCTCGTCCAAAACTTCGACCCTCACTCTCACTCAAACGTCTTCCAACAACAAGGGCTTATATCCTCTGAGTTGAGGTACATGTGTTGCTTCCTCTGGGTCGACATAGCCCTTCCCGTCTTATCGCAATATTTAAGGGACCGAGTCGACGACATGCTTAACTCGGGGATGGTCGACGAGTTGGCTCAGTTCTTCGACCAAGACGCCGCGCGTCGAACCGGGTTCGGTCTCAGAAAGGCAATTGGGGTTCCCGAGTTCGACCGGTTTTTTAATAAATACCCGCCCTCGATGAGCCAGGGCGATGATCCTCTGCGGGAGAGTGCGTACCAGGAGGCGGTGCGGGCGATTAAGGACAACACGTGCGAGTTGGCGGAGCGTCAGATAGGGAAGATCGAACGGTTGAAGCGCGCCGGCTGGGACCTACGGAGGATAGACGCGACGGAGGCGTTTCGGGGGGTGCTGACGTCAGGCTCCGATGTATGGGAGAGACAGGTGTTGGAACCAAGCGTGAAGATTGTGAAACGCTTCTTGAGGGAGTAG 954 0.5964 MRLSILQPHPHPHRIKRWPRIDASSFHRRKDKVVVIMGATGSGKSRLSIDLATLFPSSEIINSDKMQVYRGLDITTNKIPPAQRRGVPHHLLGDVDTDHHGEFSPADFRHRAADLIADITRRKNLPIVVGGSNSFVHALLVQNFDPHSHSNVFQQQGLISSELRYMCCFLWVDIALPVLSQYLRDRVDDMLNSGMVDELAQFFDQDAARRTGFGLRKAIGVPEFDRFFNKYPPSMSQGDDPLRESAYQEAVRAIKDNTCELAERQIGKIERLKRAGWDLRRIDATEAFRGVLTSGSDVWERQVLEPSVKIVKRFLRE* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0923 317 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 176 279 - -
Gso20g0923 317 Gene3D - 30 315 IPR027417 -
Gso20g0923 317 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 4-RELATED 24 316 - -
Gso20g0923 317 CDD ABC_ATPase 13 85 - -
Gso20g0923 317 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 152 IPR027417 -
Gso20g0923 317 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 24 316 IPR039657 -
Gso20g0923 317 Pfam IPP transferase 149 266 - -
Gso20g0923 317 Pfam IPP transferase 67 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0923 Gso-Chr20 38866723 38868944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0923 36 315 C2H2 Transcription Factor Family AT2G27760 27.733 3.09e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0923 K10760 - gmx:100813761 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0923 20 38866723 38868944 Gso10g2422 10 51190680 51192601 GST