Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0906 ATGGGTCTTCAAATCAAGGAACCGCTCCTTTTCACTCTTGTAACAATATCACTTATTTCAATTACAAAACTCTTGCATTCTTATTTTTCTATACCTTTCTCTCCATCCAATCTTTCCATTGCTATTGCCACCCTCATTTTTGTTCTAATCTCATACAAATTTTCCTCATCCTCTATAAAACACTCTTCCACTACTCTGCCCCCAGGTCCTCTATCTGTTCCAATATTTGGTAACTGGCTACAAGTTGGCAATGACCTTAACCACCGTCTTCTAGCATCAATGTCTCAAACCTATGGTCCCGTGTTCCTACTCAAACTAGGTTCCAAAAACTTGGTCGTGGTCTCTGACCCCGAGCTTGCCACCCAAGTGCTCCACGCACAAGGCGTAGAATTTGGCTCTCGCCCACGGAACGTTGTGTTTGATATCTTCACGGGGAATGGCCAAGACATGGTTTTCACCGTCTACGGCGACCACTGGCGCAAAATGCGAAGAATAATGACACTGCCATTCTTCACCAACAAGGTTGTCCACAACTACAGCAACATGTGGGAGGAGGAGATGGACTTGGTGGTGCGTGACCTCAACGTGAATGAGAGGGTGAGGAGCGAAGGGATAGTTATCAGAAGGCGGCTTCAGCTGATGCTGTACAATATCATGTATAGGATGATGTTTGATGCCAAGTTTGAGTCTCAAGAAGACCCTTTGTTCATTCAGGCCACCAGGTTTAACTCCGAGAGAAGCCGTTTGGCGCAGAGTTTTGAATACAATTACGGGGATTTTATACCGTTGCTCCGGCCATTCTTGAGAGGGTACCTCAACAAGTGCAAGGACTTGCAGTCTAGGAGGTTGGCATTTTTCAACACCCACTACGTTGAGAAAAGAAGACAAATAATGGCTGCCAATGGGGAGAAGCACAAGATCAGCTGTGCAATGGATCACATCATAGATGCTCAGATGAAGGGAGAAATCAGCGAAGAGAATGTGATCTACATAGTAGAAAACATCAACGTTGCAGCAATTGAGACAACACTATGGTCCATAGAGTGGGCAATAGCAGAGTTGGTGAACCATCCAACCGTCCAAAGCAAGATTCGTGATGAGATATCAAAAGTGCTAAAAGGGGAGCCAGTTACAGAATCCAACCTACACGAGCTACCATACTTACAAGCCACGGTGAAAGAGACACTGAGACTTCACACCCCAATTCCTCTTCTGGTGCCCCACATGAACCTGGAAGAAGCAAAGCTAGGAGGGCACACTGTTCCAAAAGAGTCAAAGGTGGTGGTGAATGCTTGGTGGCTTGCCAACAACCCTTCATGGTGGAAGAACCCAGAGGAGTTCAGGCCAGAAAGGTTCTTGGAAGAGGAATGTGCAACAGATGCAGTTGCAGGAGGAAAAGTTGACTTTAGGTTCGTGCCATTTGGTGTGGGAAGGAGGAGTTGCCCTGGGATCATACTTGCATTGCCAATACTGGGGCTTGTGATTGCAAAGTTGGTGAAAAGTTTTCAGATGAGTGCTCCAGCGGGGACAAAGATTGATGTGAGTGAAAAAGGAGGGCAATTCAGCTTGCACATTGCCAACCACTCCACTGTGTTGTTCCATCCAATTAAGACACTATGA 1620 0.4611 MGLQIKEPLLFTLVTISLISITKLLHSYFSIPFSPSNLSIAIATLIFVLISYKFSSSSIKHSSTTLPPGPLSVPIFGNWLQVGNDLNHRLLASMSQTYGPVFLLKLGSKNLVVVSDPELATQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHNYSNMWEEEMDLVVRDLNVNERVRSEGIVIRRRLQLMLYNIMYRMMFDAKFESQEDPLFIQATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCKDLQSRRLAFFNTHYVEKRRQIMAANGEKHKISCAMDHIIDAQMKGEISEENVIYIVENINVAAIETTLWSIEWAIAELVNHPTVQSKIRDEISKVLKGEPVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGHTVPKESKVVVNAWWLANNPSWWKNPEEFRPERFLEEECATDAVAGGKVDFRFVPFGVGRRSCPGIILALPILGLVIAKLVKSFQMSAPAGTKIDVSEKGGQFSLHIANHSTVLFHPIKTL* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0906 539 Pfam Cytochrome P450 67 526 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0906 539 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0906 539 PRINTS E-class P450 group I signature 119 140 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0906 539 PRINTS E-class P450 group I signature 214 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0906 539 PRINTS E-class P450 group I signature 327 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0906 539 PRINTS E-class P450 group I signature 347 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0906 539 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0906 539 PRINTS E-class P450 group I signature 430 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0906 539 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0906 539 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0906 539 Gene3D Cytochrome P450 57 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0906 539 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 10 537 - -
Gso20g0906 539 PANTHER OS02G0467000 PROTEIN 10 537 - -
Gso20g0906 539 PRINTS P450 superfamily signature 338 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0906 539 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0906 539 PRINTS P450 superfamily signature 472 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0906 539 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 474 483 IPR017972 GO:0005506|GO:0016705
Gso20g0906 539 SUPERFAMILY Cytochrome P450 67 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0906 Gso-Chr20 38582425 38584660 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0906 46 535 Monolignol Biosynthesis Gene Families AT2G30490 62.677 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0906 K00487 - gmx:100812188 1059.28