Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0896 ATGCACAGACACATGTACATTGACTTCAATTTGCACGCATCTGCACCTAGCAGAAATTGCTTGATATCCACAAACATGGCAATCAGGGGTGTTGATGGATGGCGAGACATGAAGAGTCTGGCTGTCCAAGTCATCACAGGGCGGTGGTTCGTGGTTTTTGCCTCCTTTCTAATCATGGCAGCCGCTGGAGCCACCTACATGTTCGGTCTCTATTCCAGCGATATCAAAACCACCCTTGGCTACGACCAAACCACTCTGAATCTCCTTAGTTTCTTCAAGGACTTGGGCACCAACGTTGGGGTCATCTCGGGCCTAATCAACGAGCTGGCTCCACCCTGGGTGGTCCTAGCCATTGGTGCCGTCCTTAACTTCTTTGGCTACTTCATGATATGGCTATCCGTCACCCAAAGAATAGCCAAACCCAAAGTGTGGCAGATGTGTCTCTACATCTGCATAGGCGCTAACTCTCAGACTTTTGCCAACACTGGTTCCCTTGTCACTTGCATCAAGAACTTCCCAGAAAGAAATGGGGTTGTGTTAGGGATCCTCAAAGGTTACCTCGGTCTTAGCGGTGCAATCATCACGCAACTCTACTCTGCTATTTACTATGATGACACCAGGGCATTGATTTTGCTCATAGCTTGGCTCCCTGCTGCTATTTCCTTCGCTTCCCTACGAACCGTTCGCTACATGAAGCCCGTTAGGCAGCATAATGAGCTCAATGTTTTCTACAGGTTTCTCTATATCTCTCTTGGCCTTGCTGGGTTTCTTTTGTTCATGATCACTATACAGAAAAGGGTCAACTTCACTCAGAGTGAGTTCGGTGTCAGCGCTGCTATTGTGCTCTTTCTGCTCCTCCTCCCACTTTCTGTTGTTTCTATAGAAGAATATAAGGTCTGGCAGAGTAAAAGGCTTGCTTTGGTTGACCCCACCCCGGTGAAAATAGTAACCGATGAGGGTGAAAAGGTCATGAAACCGATTGAGGCAACAAATGGTTGCAAAAATTCAGTTTCTTCCAAGTGGTGGGAAAATGTGTTTAGTCCACCAGAAAGAGGTGAGGACTATACAATACTTCAGGCGCTATTCAGCCTCGACATGTTGATACTATTCATATGTAGCATCTGTGGTATTGGGGGCACGTTGACCGCAATAGATAACCTGGGTCAGATAGGAAAGTCGCTTAGATACCCAAAGAAAAGCATAAGCACTTTCGTGTCCCTAGTAAGCATTTGGAATTATCTGGGAAGGGTTTTCGCTGGATTTGTTTCTGAACATTATCTACAAAAGTACAAGTTCCCTCGTCCTCTCATGCTTACACTAACCATGCTCTTGTCATGTGTTGGTCACCTTCTGATAGCATTTGACGTGCCAAATGGTCTTTATGCGGCTTCGGTAATTATTGGGTTTTGTTTTGGCGCACAGTGGCCTTTACTTTTTGCCATTATATCCGAGCTTTTTGGACATAAATATTATGCAACTTTGTATAACTTTGGAAGTGCAGCAAGTCCACTAGGGCTATATGTGCTTAATGTGGTGATGACTGGGCATTTGTATGACAAAGAAGCCAAGAAGCAACTTGCAGCATTGGGGCTTGAGAGAAAGGAAGGTCAGGAATTGAATTGCATTGGGATCCATTGCTTCAAGTTGTCCTTTATTATTATCACAGCTGCAACTTTCTTTGGTGTCATTGTTTCACTCATCTTGGTGGCTAGGACAAGAACCTTTTACAAAGGTGACATATACAAGAGATACCGGGATGCAGCCACGGTAACAGACCAAGCTGAAATGGCGAGGGTGGAGAAAGATGACAAACATGTGATGCCAACTCAGAAGTAA 1836 0.4521 MHRHMYIDFNLHASAPSRNCLISTNMAIRGVDGWRDMKSLAVQVITGRWFVVFASFLIMAAAGATYMFGLYSSDIKTTLGYDQTTLNLLSFFKDLGTNVGVISGLINELAPPWVVLAIGAVLNFFGYFMIWLSVTQRIAKPKVWQMCLYICIGANSQTFANTGSLVTCIKNFPERNGVVLGILKGYLGLSGAIITQLYSAIYYDDTRALILLIAWLPAAISFASLRTVRYMKPVRQHNELNVFYRFLYISLGLAGFLLFMITIQKRVNFTQSEFGVSAAIVLFLLLLPLSVVSIEEYKVWQSKRLALVDPTPVKIVTDEGEKVMKPIEATNGCKNSVSSKWWENVFSPPERGEDYTILQALFSLDMLILFICSICGIGGTLTAIDNLGQIGKSLRYPKKSISTFVSLVSIWNYLGRVFAGFVSEHYLQKYKFPRPLMLTLTMLLSCVGHLLIAFDVPNGLYAASVIIGFCFGAQWPLLFAIISELFGHKYYATLYNFGSAASPLGLYVLNVVMTGHLYDKEAKKQLAALGLERKEGQELNCIGIHCFKLSFIIITAATFFGVIVSLILVARTRTFYKGDIYKRYRDAATVTDQAEMARVEKDDKHVMPTQK* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0896 611 CDD MFS_Mch1p_like 47 562 - -
Gso20g0896 611 SUPERFAMILY MFS general substrate transporter 47 573 IPR036259 -
Gso20g0896 611 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 31 611 - -
Gso20g0896 611 Gene3D MFS general substrate transporter like domains 361 575 IPR036259 -
Gso20g0896 611 PANTHER MFS TRANSPORTER 31 611 - -
Gso20g0896 611 Pfam Nodulin-like 48 292 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0896 Gso-Chr20 38487885 38493612 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0896 36 603 Nodulin-like Gene Family AT2G39210 67.063 0.0 809
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0896 - - gmx:100819121 1158.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0896 20 38487885 38493612 Gso20g0896 20 38487885 38493612 ECH
Gso20g0896 20 38487885 38493612 Gso10g2446 10 51478221 51480242 GST