Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0895 ATGGCCGCTGCCATCGGAAGCATGGTGGACACGAATGGGCTCATGGTCCAAGTCATCACCGGAAGGTGGTTCGTGGTGTTCGCCTCCTTTCTAATCATGGCCGCCGCCGGCGCCACCTACATGTTCAGCCTCTACTCCGGAGACATCAAATCCGCCCTGGCCTACGACCAAACCACCTTAAACCTCCTTAGTTTCTTCAAAGACTTGGGTGGCAATGTCGGCGTCCTCTCGGGCCTCATCAACGAGATCACTCCCCCGTGGGTGGTCCTCGCCATGGGTTCCGTCCTCAACTTCTTTGGCTACTTCATGATATGGCTGGCGGTGACAAAAAAAATACCCAAGCCGCACGTGTGGCACATGTGCCTCTACATCTGCATAGGCTCGAATTCTCAGTCCTTCGCCAACACCGGTTCCCTTGTGACTTGCGTGAAGAACTTCCCAGAAAGCCGTGGGGTTGTGCTGGGCATCCTCAAAGGCTACGTTGGTCTCAGTGGAGCCATCATTACACAACTCTACTTTGCTTTTTACTACGACGATTCAAGGTCCTTGATTTTGCTCATAGGGTGGCTCCCAGCTGCTATTTCCTTCCTTTTCCTTCGAACCATTCGCTACATGAAACCCGTTCGACAGCCCAATGAGCTAAGTGTTTTCTACAAGTTTTTGTATATCTCACTTGGCCTTGCTGGGTTTCTTTTGGTCATGATCATAGTTCAGAAGCAAGTGCATTTCTCACAAAGTGAGTATGGTGTCAGTGCTGGGGTTGTGCTCTTCTTACTATTTCTTCCTCTTGCTGTTGTGTTTGTTGAACAATATAAGATCAGAGAGAGTCAAAAGCTAGCATTCATTGACCCCTCCCCGGTCAAGATAGTAGCTGAAGGAGAGTCTGCAAATGGTAATACCTCTAACACGCCAATTTCAACAGAGATTGAAGAAACTAGATGGTGGCAAAAAGTGTTAAGTCCACCGCCTCGAGGTGAGGACTATACTATACTTCAAGCCCTATTCAGCTTAGATATGATACTGCTATTCTTCGCTGGCACATGTGGTGTTGGGGGAACTTTAACCGCAATTGATAACCTTGGTCAGATTGGTACATCGCTAGGGTACCCCAAGGCTAGCATAAGCACGTTTGTGTCGTTAGTGAGCATTTGGAATTATCTGGGACGGGTTTTTTCTGGGTTTGTTTCTGAACACTTTCTACAAAAGTACAAGTTCCCTCGACCACTGATGCTCACGCTAACCCTCCTCTTATCCTGTGCCGGTCACCTTCTGATAGCCTTCGATGTGCCCAACGGACTCTACGTGGCATCGGTGATCATAGGGTTCTGCTTCGGCGCGCAATGGCCCTTGGTGTTCGCCATAATCTCGGAGCTGTTCGGGCTCAAGTACTATTCAACGTTGTACAACTTTGGAGGTGCAGCGAGCCCGATTGGGCTTTATGTGCTTAACGTGAGGGTAACTGGGCACTTGTATGACAAAGAAGCTCTGAAGCAATTGGCAGTGGCGGGGATACCAAGAAATGATGCCAAAGAATTGACTTGTATTGGGTCCAGTTGTTTTAAGTTGTCCTTCATTATTATCACTGCAGCAACCTTTTTTGGGGCCTTAATTTCACTGATTTTGGTGGCTAGGACAATTAAGTTTTACAAAGGGGATATATACAAGAGGTACCGGGAGCAAGCCGAGGAAGCCACCACTGCTGCCACTGAGATGGCGGTGGTCCAAAACCGCGGCCAGAAATTAGAACAAGAAGCTAACAAAGTTATTGGCACGTAA 1776 0.4837 MAAAIGSMVDTNGLMVQVITGRWFVVFASFLIMAAAGATYMFSLYSGDIKSALAYDQTTLNLLSFFKDLGGNVGVLSGLINEITPPWVVLAMGSVLNFFGYFMIWLAVTKKIPKPHVWHMCLYICIGSNSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYFAFYYDDSRSLILLIGWLPAAISFLFLRTIRYMKPVRQPNELSVFYKFLYISLGLAGFLLVMIIVQKQVHFSQSEYGVSAGVVLFLLFLPLAVVFVEQYKIRESQKLAFIDPSPVKIVAEGESANGNTSNTPISTEIEETRWWQKVLSPPPRGEDYTILQALFSLDMILLFFAGTCGVGGTLTAIDNLGQIGTSLGYPKASISTFVSLVSIWNYLGRVFSGFVSEHFLQKYKFPRPLMLTLTLLLSCAGHLLIAFDVPNGLYVASVIIGFCFGAQWPLVFAIISELFGLKYYSTLYNFGGAASPIGLYVLNVRVTGHLYDKEALKQLAVAGIPRNDAKELTCIGSSCFKLSFIIITAATFFGALISLILVARTIKFYKGDIYKRYREQAEEATTAATEMAVVQNRGQKLEQEANKVIGT* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0895 591 SUPERFAMILY MFS general substrate transporter 22 547 IPR036259 -
Gso20g0895 591 CDD MFS_Mch1p_like 21 535 - -
Gso20g0895 591 PANTHER MFS TRANSPORTER 7 587 - -
Gso20g0895 591 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 7 587 - -
Gso20g0895 591 Pfam Nodulin-like 22 267 IPR010658 -
Gso20g0895 591 Gene3D MFS general substrate transporter like domains 335 549 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0895 Gso-Chr20 38481521 38483665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0895 2 560 Nodulin-like Gene Family AT2G39210 69.081 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0895 - - gmx:100808975 1135.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1559 3 41529709 41531959 Gso20g0895 20 38481521 38483665 ECH
Gso20g0895 20 38481521 38483665 Gso20g0895 20 38481521 38483665 ECH
Gso20g0895 20 38481521 38483665 Gso10g2447 10 51485296 51487560 GST