Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0892 ATGGGAAAGAAATCTTTGAAGCTGCCCTCTCTTTTCAAAACCAAAGAAGCCCCAAGAAATCATCATCATCCATGGCAATTCATGCCCTCTTGTGGCCACTCAAAGACCCTCTCTTTCCGTGGTGGAGATGATGACATGTTCAAGACAGTTAACTCTATGTTCTTCGACCCTTCAGCAGAGAGCACTATCGAAACTCCCAAGTCATGGTTCACAACCTCATCTGAATCTGCAAGCATCTCAACTGAGTCAGAAGACTACTACTACTGTGATGGGGAGTCTTTGGAGATGTTGGTACGTGGTGTGAGGTCAGAGAGGCTTTTTTTCGAACCTGGTGACACAAGTTCCATCTTGGAAAAGGCCAAGGCTAGTGGATTTCCCTTCAAAGAAAGTGTGGTCCTAGCCATGGAGTCAGAGGACCCTTATGAGGACTTCAAGAGATCAATGGAGGAGATGGTTGAGTCTCATGGAGTGAGGGATTGGGAAGGCTTGGAGGAGCTTTTAACTTGGTACTTAAGGGTCAATGGTAAAAACAATCATGGGTTTATAGTGGGTGCTTTTGTTGATTTACTCTTTAGTTTAGCTGCTTCTAATGGTTCTAACACTTGTTCTGATTCAACTTCATATTCTTCTGCTGTTTCTTCTTTTGCTTCTTCCCCCTTGAGTGGCCAGAATGAGATTGTTGAGCATGGGATTGGGAATGATGGTGCTGTAACATCTTAG 720 0.4417 MGKKSLKLPSLFKTKEAPRNHHHPWQFMPSCGHSKTLSFRGGDDDMFKTVNSMFFDPSAESTIETPKSWFTTSSESASISTESEDYYYCDGESLEMLVRGVRSERLFFEPGDTSSILEKAKASGFPFKESVVLAMESEDPYEDFKRSMEEMVESHGVRDWEGLEELLTWYLRVNGKNNHGFIVGAFVDLLFSLAASNGSNTCSDSTSYSSAVSSFASSPLSGQNEIVEHGIGNDGAVTS* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0892 239 PANTHER TRANSCRIPTION REPRESSOR OFP13 6 220 - -
Gso20g0892 239 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 131 194 IPR006458 -
Gso20g0892 239 Pfam Transcriptional repressor, ovate 137 193 IPR006458 -
Gso20g0892 239 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 6 220 IPR038933 GO:0045892
Gso20g0892 239 ProSiteProfiles OVATE domain profile. 133 192 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0892 Gso-Chr20 38439738 38440727 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso20g0892 Ovate 2.2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0892 - - gmx:100527123 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1684 3 42725126 42726493 Gso20g0892 20 38439738 38440727 ECH
Gso20g0892 20 38439738 38440727 Gso20g0892 20 38439738 38440727 ECH
Gso20g0892 20 38439738 38440727 Gso10g2451 10 51532932 51533954 GST