Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0860 ATGGGTAGTTGTGGAAGAGAAGGATCAGTGAGACAATATGTAAGATCGAAGGTTCCTCGTTTAAGGTGGACTCCTGAGCTGCACCGTTGCTTTGTTCATGCTATTGATAGCCTTGGAGGCCACCATAAGGCTACTCCGAAGCTTGTTCTTCAGTTGATGGATGTTAAAGGGCTCACGATTTCACACGTCAAGAGCCATCTTCAGATGTACAGAAGCATGAGGGGTGACTTGGGCAGACAAGGTAGGACACCCTCCCAACATAGGAACCAATCTTTTGAGGAGCATGATGATGGATGTGTTGATGAAGGGAATGATGTTGGTGTTGAGTACTCTTGTTCGAAACCAATGGGAAGAGAATCTGATTCCTTCTTCGGCCACAGTAATCTCCCTCCAAAAAGAGCAAGAATCGAGACGAGGAGTTCCATCTCAGAGAGCCTGCAGTGCAGCCAAAGATTATGTGATGCAGTTCAAAATCCGTACTGTTTTTATGATTATCTGCAACAGAAGAAGCCCATGGCTGATGAGCACAAGGAGTTCTCAACATGGCAGCAGGCACAACCCCATTCCCTTCTGTTTCCAGAATTTCCCAACCACACTTCATTCAATTCTCCTAACCAACAATCTGATTTCCTTCAGGTTACTAAATTAAATGAAGGAAAGAGCACTTCACAGCCTAGTAATGTACTTGTGAACACTACTACTGAGACAGCTATTGCAGAAGTTGAAGATGAATTGTCATTATCGCTCACATTGCCAAATCCTTCACCTCAGAGTTCAGGCAGTGAGATAAGTGAGGCAATCTCATCATGCCCTGGGTTTGGCAACAACTACAAGGACTGCTCTAGTTCATCCACTCACACTCTCAAAGAAAGAATTAATTTGGACCTATCTTTAGCCCTATGTGGCAATTGA 912 0.443 MGSCGREGSVRQYVRSKVPRLRWTPELHRCFVHAIDSLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGDLGRQGRTPSQHRNQSFEEHDDGCVDEGNDVGVEYSCSKPMGRESDSFFGHSNLPPKRARIETRSSISESLQCSQRLCDAVQNPYCFYDYLQQKKPMADEHKEFSTWQQAQPHSLLFPEFPNHTSFNSPNQQSDFLQVTKLNEGKSTSQPSNVLVNTTTETAIAEVEDELSLSLTLPNPSPQSSGSEISEAISSCPGFGNNYKDCSSSSTHTLKERINLDLSLALCGN* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0860 303 MobiDBLite consensus disorder prediction 76 102 - -
Gso20g0860 303 Gene3D - 18 74 - -
Gso20g0860 303 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Gso20g0860 303 SUPERFAMILY Homeodomain-like 17 72 IPR009057 -
Gso20g0860 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Gso20g0860 303 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 303 IPR044848 GO:0003700
Gso20g0860 303 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 303 - -
Gso20g0860 303 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0860 Gso-Chr20 38089345 38093671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0860 1 74 G2-like Transcription Factor Family AT1G14600 75.949 2.45e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso20g0860 Myb_DNA-binding 1.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0860 - - gmx:100787188 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0860 20 38089345 38093671 Gso10g2479 10 51792147 51796450 GST