Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0847 ATGTTATCGGGGTTGATGAACTTATTGAGGGCCTGCTTTCGGCCGGGTTCGGATGGATTTACACGTGCAGGTTCGGATGCCGGTGGTAGACAGGATGGACTATTGTGGTACAAGGACTCGGGGCAGCACTTGAATGGGGATTTTTCAATGGCTGTAATCCAAGCCAATAACTTGCTGGAAGATCAGAGCCAGATTGAATCAGGCTGTTTGAGCTCCAATGAATCCGGCCCTTATGGTACCTTCATCGGTGTCTATGATGGCCATGGAGGGCCCGAGACATCACGGTTTATCAATGATCACCTATTTCACCATCTCAAGAGATTCACTTCAGAGCAACAATCAATGTCGGTGGATGTAATTCGCAAGGCACTCCAAGCAACAGAAGAGGGGTTTATTTCGGTGGTTGCCAGACAGTTTTCTCTGTCACCACAAATTGCGGCTGTCGGGTCATGCTGTCTTGTTGGTGTTATTTGTAATGGAACCCTTTACATAGCAAACCTTGGGGATTCCCGGGCAGTTTTGGGAAGAGCAGTCAAGGCAACTGGCGAGGTTTTAGCCATGCAATTATCAGCAGAGCACAATGCATCGATAGAGACTGTAAGACAGGAGCTGCATGCTTCACATCCTGATGACCCAAATATTGTGGTTTTAAAGCATAATGTATGGCGTGTGAAGGGCCTTATTCAAGTTTCTAGATCTATTGGTGATGTATATTTGAAAAAGGCCGAGTTCAATCGAGAACCACTATATGCTAAGTTTCGACTTCGTGAACCATACAAGATGCCAATACTAAGCTCAGAACCATCAATATCAGTGCATCATTTGCAGCCACATGATCAATTTATTATATTCGCATCTGATGGACTCTGGGAGCACCTTAGCAATCAAGAAGCAGTTGATATAGTTCAAAACAGTCCCCGCAGTGGAAGCGCTAGGAGGCTGGTAAAAGCTGCGCTTCAAGAAGCTGCAAAGAAGAGAGAAATGAGATATTCAGATTTAAAGAAAATTGATCGCGGAGTTCGTCGTCATTTCCATGATGATACCACGGTGATTGTTGTGTATCTTGACTCAAATCTCGTGAGTAGGGAAAGCACTGTGAAGTTCCCTGGCATTTCTGTTAGAGGGGGTGGTATTAACCTGCCTCATAACACACTGGCACCTTGTACCACACCAACAGAGATTGGTGGTAACTGA 1194 0.4539 MLSGLMNLLRACFRPGSDGFTRAGSDAGGRQDGLLWYKDSGQHLNGDFSMAVIQANNLLEDQSQIESGCLSSNESGPYGTFIGVYDGHGGPETSRFINDHLFHHLKRFTSEQQSMSVDVIRKALQATEEGFISVVARQFSLSPQIAAVGSCCLVGVICNGTLYIANLGDSRAVLGRAVKATGEVLAMQLSAEHNASIETVRQELHASHPDDPNIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRLREPYKMPILSSEPSISVHHLQPHDQFIIFASDGLWEHLSNQEAVDIVQNSPRSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDTTVIVVYLDSNLVSRESTVKFPGISVRGGGINLPHNTLAPCTTPTEIGGN* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0847 397 Pfam Protein phosphatase 2C 77 324 IPR001932 -
Gso20g0847 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Gso20g0847 397 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 6 387 - -
Gso20g0847 397 SMART PP2C_4 39 353 IPR001932 -
Gso20g0847 397 PANTHER ALPHABET, ISOFORM E-RELATED 6 387 - -
Gso20g0847 397 CDD PP2Cc 48 355 IPR001932 -
Gso20g0847 397 Gene3D - 37 366 IPR036457 -
Gso20g0847 397 SUPERFAMILY PP2C-like 55 356 IPR036457 -
Gso20g0847 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0847 Gso-Chr20 37920785 37925690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0847 1 393 PP2C-type Phosphatase Gene Family AT4G38520 76.590 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0847 - K01102 gmx:100794801 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0847 20 37920785 37925690 Gso10g2490 10 51933491 51938306 GST