Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0830 ATGATGTTGACACATTGCCATCAATTGTGCAAGCCAGTTTCCATCATGATTCTAGTTAACTTGGCTCTGGCTTTTGTCAATTTACTTCTGAAGAAGGTTCTTAATGAAGGAATGGACTACATGTCCATTATAACATATCGACAGGCAATTTCATTTATCTTCATGGCACCTATTGCCTGCATCTATGAAAGGAAACACAAACTGGAGGTTCACATAATATGTCTCCTTTTCCTCAGTGCTATTCTTGGAATAACAATTCCTCAATACTTATTTCTTCTTGGACTTGAATATACGTCTGCCACATTCTCATGTGCGTTCCTCAACATGGTGCCTGTATTTACGTTCATTATGGCAGTGCCATTTGGGGTAGAGAAGGTGAACATGCAAAGCAAGAGTGGTAAAGCCAAAGTCATGGGAACTTTGGTGTGCATTGGTGGAGCTTTGTTATTGGTCCTTTATAAAGGAATGCCCCTTATCAACCCACAATCTCAACACATAGCAAACAAAATTACAAGCACGCTTCCAGCTGCCAAGTTAGAGAAATGGATTGTAGGCTCCATACTTCTGACTCTAGGTTGCCTCCTGTGGTCTTCATGGTTCATTATACAAGCAAAGATTAGCAAAAAATACCCATGTCAATACTCTAGTACAGCTATTTTGTCACTTTTTGCTGCCATTCAATCAGCGACATTAACTTTGGTCTTCAAGAGAAATAATGCTTCGTGGATTCTCAAAGGAAAGCTTGAAATAATGAGTGTTGCATATGCTGGATTGATAGGATCGGGCTTATGCTATGTGGCAATGTCATGGTGTGTTAAACAAAGGGGTCCAGTTTTTACAGCAGCTTTTACCCCCCTTATGCAGATATTTGTGGCCACGCTTGATTTCTCTGTACTAAAGGAGGAAATTTACCTGGGAAGTTTGGCAGGATCTGCCTTGGTTATTGCTGGCGTGTATATTCTTCTATGGGGAAAAAGCAAAGAGGAAGGGCAACATGTTCTGAAGGATACACAAACAAATCAAGATGTAGAATGTCAATAG 1041 0.4025 MMLTHCHQLCKPVSIMILVNLALAFVNLLLKKVLNEGMDYMSIITYRQAISFIFMAPIACIYERKHKLEVHIICLLFLSAILGITIPQYLFLLGLEYTSATFSCAFLNMVPVFTFIMAVPFGVEKVNMQSKSGKAKVMGTLVCIGGALLLVLYKGMPLINPQSQHIANKITSTLPAAKLEKWIVGSILLTLGCLLWSSWFIIQAKISKKYPCQYSSTAILSLFAAIQSATLTLVFKRNNASWILKGKLEIMSVAYAGLIGSGLCYVAMSWCVKQRGPVFTAAFTPLMQIFVATLDFSVLKEEIYLGSLAGSALVIAGVYILLWGKSKEEGQHVLKDTQTNQDVECQ* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0830 346 Coils Coil 343 346 - -
Gso20g0830 346 Pfam EamA-like transporter family 185 322 IPR000620 GO:0016020|GO:0016021
Gso20g0830 346 Pfam EamA-like transporter family 14 151 IPR000620 GO:0016020|GO:0016021
Gso20g0830 346 PANTHER WAT1-RELATED PROTEIN 10 344 - -
Gso20g0830 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Gso20g0830 346 PANTHER WAT1-RELATED PROTEIN 10 344 IPR030184 GO:0016021|GO:0022857
Gso20g0830 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0830 Gso-Chr20 37681111 37683217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0830 8 256 Nodulin-like Gene Family AT3G30340 46.215 1.41e-79 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0830 - - gmx:100802053 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0830 20 37681111 37683217 Gso10g2505 10 52093309 52095269 GST