Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0820 ATGTCGAACTCCGACGGCACCACTAACGGCGCAATCTCTGAGGCGCAGAGACAGCAGCAACAGCAAGGGGGGAAGGCGTTAGCCGTTAAGAAGCCGCCGTCAAAGGACCGTCACAGCAAGGTGGACGGTCGCGGGCGCCGCATAAGGATGCCAATCATATGCGCCGCACGTGTGTTCCAGCTCACGCGCGAGCTTGGCCACAAGTCCGACGGTCAAACCATCGAGTGGCTCCTCCGTCAGGCCGAGCCCTCCGTCATCGCCGCCACCGGCACCGGCACCATCCCCGCCAGCTTCTCCTCCGTCTCCCTCTCCTCCCCTTCCTCCACCTCCGACTACAAGCCCCAGTTACTCGCTCCCACTCCCTTCATCCTCGGCAAGCGCATACGCACCGACGAAGACTCTTCCAAAGACGAAGCTGTTTCCGTGGGCCCCTCTCTCGTGGGGCCGTATGCCCCTCCCGGACCAGGGGTCGTCCCGGCCTGGCCCGATTTCGGACAAATTTGGAGTTTTGTCGCCGCCGCTGCTGCTCCCGAAATGGTGTCGGTGCCGCAGCAGCAGCAGCAGCAGGCTTCGTTGTTCGCTCATCACCACCGTCAGCAGCAGCAGCTGGCCATCGGAGAAGCTTTGGCGGCGAGGGTGGGAAATTACCTTCCGGGACATCTGAATTTGCTCGCTTCATTGTCAGGTGGACCTGGGAATTCTGGTCGGAGAGACGATGAGCCTCGTTGA 729 0.62 MSNSDGTTNGAISEAQRQQQQQGGKALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSVIAATGTGTIPASFSSVSLSSPSSTSDYKPQLLAPTPFILGKRIRTDEDSSKDEAVSVGPSLVGPYAPPGPGVVPAWPDFGQIWSFVAAAAAPEMVSVPQQQQQQASLFAHHHRQQQQLAIGEALAARVGNYLPGHLNLLASLSGGPGNSGRRDDEPR* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0820 242 MobiDBLite consensus disorder prediction 1 46 - -
Gso20g0820 242 MobiDBLite consensus disorder prediction 30 46 - -
Gso20g0820 242 ProSiteProfiles TCP domain profile. 34 88 IPR017887 -
Gso20g0820 242 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 239 IPR005333 GO:0003700
Gso20g0820 242 MobiDBLite consensus disorder prediction 1 25 - -
Gso20g0820 242 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 239 - -
Gso20g0820 242 Pfam TCP family transcription factor 34 136 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0820 Gso-Chr20 37619590 37621560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0820 7 242 TCP Transcription Factor Family AT5G23280 62.140 8.87e-87 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gso20g0820 TCP 7.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0820 K16221 - gmx:100800443 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0820 20 37619590 37621560 Gso10g2512 10 52147554 52149596 GST