Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0801 ATGGGAGATGTGAAAGTACTTGGATTTTGGTCAAGCCCTTTCGTTCATAGAGTGATATGGGCTCTAAAGTTGAAGAACATTAGTTATGAGTACATAGAGGTTGATAGGTTCAACAAAAGTGAGCTACTTCTTCAATCCAATCCAGTTTACAAGAAAGTTCCTGTGCTTATTCATGGAGGCAAAGCCATTGCAGAGTCTCTTGTCATTCTTGAATACATCGAAGAAACATGGCCAGAGAACCACCCATTGCTGCCAAAAGACAACCATCAAAGGGCATTGGCTCGCTTTTGGATTAAATTTGGAGAGGATTCGATTGCTTCTATTACCGATTTGTTTCTTGGACCCTCTAAAGATGAACAAGAAAGAGCAAGTGCAAAGAAAAAGGCAGAAGAAACTATCATGGTAATGGAAGAGCAAGGCCTAGGAGACAAGAAGTTCTTTGGAGGCAACAATATTGGAATGGTGGATATAGCTCATGGATGCCTAAGTCATTGGTTAGAAGGCTTGGAGGAAATTGTGGGGATGAAATTGATTGAGCCAAACAAATTTCCTCGGTTGCATGCGTGGACTCAAAATTTCAAGCAAGTTCCTGTTATTAAAGAAAACCTTCCTGATTATGAGAAACTGTTGATCCATCTTGAATGGCGTAGGCAGGGATATGTTACATAG 669 0.4051 MGDVKVLGFWSSPFVHRVIWALKLKNISYEYIEVDRFNKSELLLQSNPVYKKVPVLIHGGKAIAESLVILEYIEETWPENHPLLPKDNHQRALARFWIKFGEDSIASITDLFLGPSKDEQERASAKKKAEETIMVMEEQGLGDKKFFGGNNIGMVDIAHGCLSHWLEGLEEIVGMKLIEPNKFPRLHAWTQNFKQVPVIKENLPDYEKLLIHLEWRRQGYVT* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0801 222 CDD GST_N_Tau 4 77 - -
Gso20g0801 222 Pfam Glutathione S-transferase, N-terminal domain 4 74 IPR004045 -
Gso20g0801 222 Pfam Glutathione S-transferase, C-terminal domain 111 194 IPR004046 -
Gso20g0801 222 PANTHER GLUTATHIONE TRANSFERASE GST 23-LIKE 1 217 - -
Gso20g0801 222 CDD GST_C_Tau 89 216 IPR045074 GO:0004364|GO:0006749
Gso20g0801 222 Gene3D - 84 221 - -
Gso20g0801 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Gso20g0801 222 SFLD Glutathione Transferase (cytosolic) 2 219 IPR040079 -
Gso20g0801 222 SFLD Main.3: Omega- and Tau-like 2 219 IPR045073 -
Gso20g0801 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 221 IPR010987 -
Gso20g0801 222 ProSiteProfiles Glutaredoxin domain profile. 1 91 - -
Gso20g0801 222 Gene3D Glutaredoxin 1 83 - -
Gso20g0801 222 SUPERFAMILY GST C-terminal domain-like 75 219 IPR036282 -
Gso20g0801 222 SUPERFAMILY Thioredoxin-like 3 103 IPR036249 -
Gso20g0801 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 217 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0801 Gso-Chr20 37438035 37439321 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0801 4 214 Glutathione S-transferase Gene Family AT3G09270 47.418 4.32e-60 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0801 K00799 - gmx:547586 459.144