Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0800 ATGCAGCAGCCGGAGAAGCAGATTAACGCGCCAGCCGGAATGCCTCTCCCGGAGCGCCGGAGAAGGCGACGGAGCTCTGGTATATGTGCCACTTCCGGTGTTAGGGTTCAGCCACAAGAAGAACAACAACAAGTGGCAACGCGTGGGACTGTTCTTACAGACTCTGACCAGTTCTATTTCAACTGGTATGCTCACATTGACGTTCACGAAGAGATGATCAAGGATCGTGTGCGGACTGATGCTTATAAGAATGCAATAATGCGTCATAAGGATTTTATTAGAGACAAAGTTGTACTTGATGTTGGATGCGGCACTGGCATCCTTGCTATATTTTGTGCTCAGGCTGGTGCAAGACGGGTGTATGCAGTTGAAGCAAGTAACATTGCCCTGCAGACAATCCGTGTTGTTGAAGCTAACAATCTTTTGAACATTATCACGGTATTGCACGGACGAGTTGAGGATGTTGAAATCGGTGAAAAGGTTGATGTTATAATTTCAGAATGGATGGGCTATATGCTTCTATGTGAGAGTATGCTTGGAAGTGTTATTACTGCCAGAGATCGCTGGCTCAAACCTGGAGGTCTAGTTCTTCCTTCAAAGGCAACGTTGTACATGGCTCCTTTTACACATGCAAAAAGATACCGGGAAAGCATTGACTTCTGGCGAAGTGTTTATGGAATTAATATGTCTGCCATGGTACCATTAGCAAAACAGTGTGCATTCGTGGGACCTTCTGTGGAGACAATTACCAGTGAAAATGTTTTGGCATGGCCACAAGTGGTGAAATGTGTGAACTGTTCTTCTGTTACCATTCCTGAGCTAGAATCTATAACAACAAGGTTTAAGTTCAATTCATTGGTGAAAGCACCACTACATGGTTTTGCATTTTGGTTTGATGTTGAATTTACTAGGCTATCACCAGAGCCAATAAGTTTTCAGTTATCAACTTCACTTGTTGACGATCATCCAGTGGGTAGTCAGAGACAAGATTTGAGAGACCCTACACTGCTCCTGTCCACTGCACCTGAAGCCCTGCCAACACATTGGCAACAGACCTTGATATACTTTTATGAGCCGATAGAACTGGAACAAGATCAACTTATTGAAGGAAAAGTGACATTATCACAAAGCCAAGAAAATCACCGGAATCTGAATATTGAACTTGTATATGCGAGGTCAATCATATGTCAAAGTGTCTGTTATGTGAAAGTGTCTGACAACATTCCTTGA 1230 0.4341 MQQPEKQINAPAGMPLPERRRRRRSSGICATSGVRVQPQEEQQQVATRGTVLTDSDQFYFNWYAHIDVHEEMIKDRVRTDAYKNAIMRHKDFIRDKVVLDVGCGTGILAIFCAQAGARRVYAVEASNIALQTIRVVEANNLLNIITVLHGRVEDVEIGEKVDVIISEWMGYMLLCESMLGSVITARDRWLKPGGLVLPSKATLYMAPFTHAKRYRESIDFWRSVYGINMSAMVPLAKQCAFVGPSVETITSENVLAWPQVVKCVNCSSVTIPELESITTRFKFNSLVKAPLHGFAFWFDVEFTRLSPEPISFQLSTSLVDDHPVGSQRQDLRDPTLLLSTAPEALPTHWQQTLIYFYEPIELEQDQLIEGKVTLSQSQENHRNLNIELVYARSIICQSVCYVKVSDNIP* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0800 409 CDD AdoMet_MTases 98 197 - -
Gso20g0800 409 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 56 387 IPR025799 GO:0016274|GO:0018216
Gso20g0800 409 PANTHER BNAC03G41340D PROTEIN 30 392 - -
Gso20g0800 409 Pfam Methyltransferase domain 98 194 IPR041698 -
Gso20g0800 409 Gene3D - 200 397 - -
Gso20g0800 409 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 30 392 IPR025799 GO:0016274|GO:0018216
Gso20g0800 409 Gene3D Vaccinia Virus protein VP39 52 198 IPR029063 -
Gso20g0800 409 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 63 390 IPR029063 -
Gso20g0800 409 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0800 Gso-Chr20 37428147 37437111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0800 59 371 C2H2 Transcription Factor Family AT3G12270 36.170 6.53e-59 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0800 K11437 - gmx:100795672 778.089