Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0757 ATGTCCGAAGAAATGTACGGCGTGCTCCTTTATTACAAGTACGCTGAAATTCCCAACCTCGACGACCTCCTCACTTTCTACCACTCCAACTGCTCCTCCCTCAGCCTCCTCGGTCGTGTTCGGCTTTCTTCCCGCGGCGTCAATGTCACCGTTGGCGGCAACTTATCCTCTCTCGAGATCCACATCGAAGCCCTCAAAGCCTACAACTCTCTGTTTCACGACACTGATTTCAAGCTCGCCAATTGTCATCAGCCATTAAACGACAAAGTAGCCCAGGAATGTGGATTCACTTCTCTATCTATTCGGATCGTCGATGAACTTGTCACTCTCAGTTCTCATCCGCTGTTAAAGTCACCGGATATCTCAAATGCCGGAAAGCATCTCTCTGCACTTGACTTCCATTCTTCCCTCCACAATACCAACAGGGAGAGTCCAGAAAATGACCTTGTTTTACTTGATGCAAGGAATCTGTATGAAACAAGAATTGGCAAATTTCATGTGCCTAATATTGAAACTTTGGATCCACAAGTTAGGCAGTATAGTGATTTGTCCTCTTGGATAGATGATAACGGTGAGCGGTTGAAAGGAAAAAATATCCTCATGTATTGTACTGGTGGAATCAGATGTGAAATGGCATCGGCATATATTAGGTCAAAAGGTGCTGGGTTTGAGAATGTGTTTCAGCGGTATTTGGAGCAATTCCCAGATGGTGGGTTTTTCAAAGGAAAGAATTTTGTTTTTGATCACCGGATATCAGTTGGAAGTTCAGATGCTAATGTTATTGGGACCTGCCTTATTTGTCAATGTTCATTTGATGATTACTCGTCTCGCTGCCGGTGTGCTTACTGCCGAATGCTTGTTTTGGTTTGTGGTAGTTGCCAGAATGAATCTACACAGTACGTTTGTGAGCTTTGTCAGAAACAGGGCAAGGTCGTTAGGTCAACACAATTAATTGAAAATGGTGAATCAAAATCATCATTGCCAGGTGCCGAATTCCAGAATTTTTCTTCAGATACTATGTGTTTGCCTCAAGTGCCTAGGGGAGATGATCCAAGGACCTCAAGAAAACTGAGAATCTTGTGCTTGCATGGGTTCCGACAGAATGCATCCAGTTTCAAAGGCAGAACAGCATCACTAGCCAAGAAACTCAAGAAAATGGCTGAATTTGTTTTTATCAATGCTCCTCATGAATTGCCATTCATTTACCAAATCCCCGTGTCCGAGCTCAATGTGAATTGTGCATCATCATTGCCACCTAGTCCTCCTCCACCTTTGGAGAATTGCAAGAAGAAGTTTGCATGGTTTTTGGCACCCAACTTTGATGGAAGTAGTGGTGTTGATTGGAAGGTAGCAGACGGTCCATTCGATGCACTTCAATACCAGCAGCAAACTGATGGATATGATATTTCTGTATCACACTTGAAGAATGTGTTTTCCCAACAAGGACCATTCGATGGAATCTTGGGATTTTCACAGGGAGCAGCAATGGCTGCCTTAATCTCTGCACAACAAGAAAAGCTGAAAGGTGAAATGGACTTTAAATTTGTAGTCCTGTGCTCTGGCTTTGCTCTCCGGATGAAAGAGATGGAGTGTGGCCCTATCAAGTGCCCGTCTCTTCATATTTTTGGTAATGAGCATGGTAAAGACAGACAAATAGCTAACCAAGCTAGCAAGGAACTTGTTTCTCTATATGATAGTGATTGTTCTGGGATCGTTGAGCATGATTGTGGTCATATAATTCCTACCCGGTCCCCTTACATTGATGGGATCAAGGATTTCCTTGGGCGTTTTCTGTAA 1797 0.4352 MSEEMYGVLLYYKYAEIPNLDDLLTFYHSNCSSLSLLGRVRLSSRGVNVTVGGNLSSLEIHIEALKAYNSLFHDTDFKLANCHQPLNDKVAQECGFTSLSIRIVDELVTLSSHPLLKSPDISNAGKHLSALDFHSSLHNTNRESPENDLVLLDARNLYETRIGKFHVPNIETLDPQVRQYSDLSSWIDDNGERLKGKNILMYCTGGIRCEMASAYIRSKGAGFENVFQRYLEQFPDGGFFKGKNFVFDHRISVGSSDANVIGTCLICQCSFDDYSSRCRCAYCRMLVLVCGSCQNESTQYVCELCQKQGKVVRSTQLIENGESKSSLPGAEFQNFSSDTMCLPQVPRGDDPRTSRKLRILCLHGFRQNASSFKGRTASLAKKLKKMAEFVFINAPHELPFIYQIPVSELNVNCASSLPPSPPPPLENCKKKFAWFLAPNFDGSSGVDWKVADGPFDALQYQQQTDGYDISVSHLKNVFSQQGPFDGILGFSQGAAMAALISAQQEKLKGEMDFKFVVLCSGFALRMKEMECGPIKCPSLHIFGNEHGKDRQIANQASKELVSLYDSDCSGIVEHDCGHIIPTRSPYIDGIKDFLGRFL* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0757 598 ProSiteProfiles Rhodanese domain profile. 145 239 IPR001763 -
Gso20g0757 598 Pfam UPF0176 acylphosphatase like domain 7 106 IPR040503 -
Gso20g0757 598 Gene3D alpha/beta hydrolase 353 598 IPR029058 -
Gso20g0757 598 Gene3D - 117 268 IPR036873 -
Gso20g0757 598 Pfam Serine hydrolase (FSH1) 355 588 IPR005645 -
Gso20g0757 598 SUPERFAMILY alpha/beta-Hydrolases 358 598 IPR029058 -
Gso20g0757 598 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 127 227 IPR036873 -
Gso20g0757 598 Pfam Rhodanase C-terminal 241 306 IPR022111 -
Gso20g0757 598 Gene3D - 1 108 - -
Gso20g0757 598 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 3 597 IPR020936 -
Gso20g0757 598 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 3 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0757 Gso-Chr20 36898299 36902305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0757 3 598 Sulfurtransferasese or Rhodanese AT1G09280 62.706 0.0 747
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0757 - - gmx:100786152 1200.65