Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0755 ATGGCGCGTACTCCTAAACCTAAAGGCGGCCCCTCCGCTGCGGCCTCCGCCGCCACTGCCTTCTTCAAACCCGGTACTGCCGTCGAAGTCAGTTCCGAGGACGACGGTTTCCGGGGATCCTGGTTCACCGGCACCGTCATCCGCCGCCTCGCCTCCGAGAGGTTCCTAGTCGAATACGACAACCTCTTGGCGGACGACAAAACCACGAAGAAGTTGAGAGAAGTCCTCGGTCTCCGCCACCTCCGCCCTCTTCCCCCGACGGAGACTGACCGCGAATTCAAATTCGGCGACGAGGTTGATGCGTTCCACAACGACGGTTGGTGGGAGGGCCACATAACCCAGGAATTGGAGAACGAAAGATTTGCGGTGTATTTCAGAGTGTCCAAGGAGCAATTGGTCTTTTCCAAGGAACAACTCAGGCTCCACCGGGAGTGGTTAAATCACGATTGGGTCCCACCACTGCAGCAGAAACAACAAAGGCAACAGGGCAATGGTGAATCGAAGAAAGTGTTGTTGACACCGAATGTGAAATCTGTTGAAACTGTAAAGGGGAAGGGGATAGGTGTGGGGGCGATAGTTGAGGTTAGCAGTGATGAAGATGGGTTCAGTGGAGCTTGGTTTGCTGCCACTGTTGTTGAGGCACTGGGGAAGGATAAGTTCCTTGTTGAGTACCATGATCTGTTGGCTGATGATGATTCCCAGCTTAGAGAGGAGATTGATGCTCTGCACATTAGGCCTCATCCGCTGGACACGGATGTTGATGGTCAATTCAGTATTCTTGATGAAGTTGATGCTTTCTACAATGATGGTTGGTGGGTTGGTGTGATTTCCAAGGCTCTTGCAGATTCAAGGTATGTAGTTTACTTCAGGTCTTCTAATGAAGAACTGGAGTTTGAGAACTCCCAGTTGAGGCTGCACCAGGACTGGATTGGTGGCAAATGGGTCATGCCTTGTAAGGCATTGAAGTTGTGA 972 0.5185 MARTPKPKGGPSAAASAATAFFKPGTAVEVSSEDDGFRGSWFTGTVIRRLASERFLVEYDNLLADDKTTKKLREVLGLRHLRPLPPTETDREFKFGDEVDAFHNDGWWEGHITQELENERFAVYFRVSKEQLVFSKEQLRLHREWLNHDWVPPLQQKQQRQQGNGESKKVLLTPNVKSVETVKGKGIGVGAIVEVSSDEDGFSGAWFAATVVEALGKDKFLVEYHDLLADDDSQLREEIDALHIRPHPLDTDVDGQFSILDEVDAFYNDGWWVGVISKALADSRYVVYFRSSNEELEFENSQLRLHQDWIGGKWVMPCKALKL* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0755 323 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 16 319 - -
Gso20g0755 323 Pfam Agenet domain 96 154 IPR008395 -
Gso20g0755 323 Pfam Agenet domain 25 86 IPR008395 -
Gso20g0755 323 Pfam Agenet domain 261 318 IPR008395 -
Gso20g0755 323 Pfam Agenet domain 190 248 IPR008395 -
Gso20g0755 323 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 16 319 - -
Gso20g0755 323 SMART agenet_At_2 185 252 IPR014002 -
Gso20g0755 323 SMART agenet_At_2 20 89 IPR014002 -
Gso20g0755 323 SMART agenet_At_2 91 147 IPR014002 -
Gso20g0755 323 SMART agenet_At_2 255 311 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0755 Gso-Chr20 36875921 36880153 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0755 197 309 PHD Transcription Factor Family AT5G58610 29.104 1.79e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0755 - - gmx:100805605 617.846