Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0744 ATGGCGAGTAGTATTATTCCACTCTTGGCCATGATTATTGTACAATTGGGCTATGCAGGGATGAATATTACCTCAAAGCTTGCAATACAATCTGGCATGCAACCTCTTGTACTTGTTGCTTATCGCCAAATTTTTGCAACTATTTCCCTTGCTCCCTTCGCTTTTTGGTTTGAACGGAATACGGCTCCCCGAATGACAAAGCACATTGCGCTCCAGATATTACTATCTTCCTTAACAGGAGTAACAGGAAATCAGATTCTATACTTTTTGGGGCTTAAATATTCAACCGCTACAATTGCATGTGCACTAAACAACTTGCTCCCAGCATTCACTTTTGTTCTTGCAGTCCTCTCTAGACAAGAGAATTTGAGAATCAAGACTAGGGCAGGGGTAGCGAAGGCCTTAGGAACAGTCCTTAGTGTGGGTGGAGCGGTGCTTTTATCATTTTACCATGGAGAAGTCCTTGGTCTAGGTGAGTCAGAGATTCACTGGAGATATGCAGAAAAAATGCAAAGAGAATCCTCTTCTTCTGGGGGTGGAACAAACTTGATTCTAGGCCCTGTTGCTGTAATTGTTAGTGCTCTTCTTTGGGCAGTATGGTTCATAGTTCAAGCAAACATGAGCAAGAGCTATCCAGCTCCTTACACTAGCACTTTCTACATGTGTTTGATGGCAAGCATTCAGTGTGTGGCCATTGCCTTGTCTGCTGAACACAATGTCTCAGCTTGGTCACTCCACAGTACTATAAGACTCACCTCTGCACTTTATGCGGGGACTATTTCTACTGGGCTAGCGTATGTGCTAATGTCATGGACCATAGAGAGGAAAGGTCCCCTTTATGTGTCTGTGTTCTCCCCTTTGCTGCTTGTCATCATTGCTGTTGCTAGCTGGGCTTTGCTTCACGAGCAATTATACGTTGGAACTGCCATTGGGTCTCTGCTGATAGTGTTGGGGCTATATTTTGTTTTGTGGGGAAAGAACAAAGAGATGAATAAGATAGACATGGTTGAAGTTGAAGGCACAGTCATGGAGGCAATAAAGGAAAGCGAGAAGGATGAGGTGAAAGACCTGGAATTGCAACCCTATGATCCTTCCAACGGTAATGGTAACCATCATGATGCTAATTAA 1128 0.4371 MASSIIPLLAMIIVQLGYAGMNITSKLAIQSGMQPLVLVAYRQIFATISLAPFAFWFERNTAPRMTKHIALQILLSSLTGVTGNQILYFLGLKYSTATIACALNNLLPAFTFVLAVLSRQENLRIKTRAGVAKALGTVLSVGGAVLLSFYHGEVLGLGESEIHWRYAEKMQRESSSSGGGTNLILGPVAVIVSALLWAVWFIVQANMSKSYPAPYTSTFYMCLMASIQCVAIALSAEHNVSAWSLHSTIRLTSALYAGTISTGLAYVLMSWTIERKGPLYVSVFSPLLLVIIAVASWALLHEQLYVGTAIGSLLIVLGLYFVLWGKNKEMNKIDMVEVEGTVMEAIKESEKDEVKDLELQPYDPSNGNGNHHDAN* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0744 375 PANTHER WAT1-RELATED PROTEIN 1 346 - -
Gso20g0744 375 PANTHER WAT1-RELATED PROTEIN 1 346 IPR030184 GO:0016021|GO:0022857
Gso20g0744 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 328 - -
Gso20g0744 375 MobiDBLite consensus disorder prediction 351 375 - -
Gso20g0744 375 Pfam EamA-like transporter family 7 148 IPR000620 GO:0016020|GO:0016021
Gso20g0744 375 Pfam EamA-like transporter family 186 323 IPR000620 GO:0016020|GO:0016021
Gso20g0744 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0744 Gso-Chr20 36760053 36763527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0744 3 370 Nodulin-like Gene Family AT1G09380 55.163 1.71e-146 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0744 - - gmx:100802059 732.635