Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0737 ATGGGTGCTGATCTTAAAGCTGAATTGTCTGGGAAAACTTTTGTTTTTGGTCTTAAGGTTTGGCAAATAATTGGAATTGCGGTTGGATTGTTTATTGTTGTCATCCTCTGTGTGCTCCCATTTTGCCTTACTTCAAGGAAGAAAACTAGAAGAGCCAGGAACAGAATTCCTGCTAGTCATATTCCTCCTGTCTCAAAGGAAATCACGGAAGTGCGGGTTGAGCAAGTGCCCGCAAATGGATTTGTTCCTCGTGAAGGAATACTTCTTACCATTCATGATAAGTCCAGTGACAAAGAATCAGACAAGGTTATGCTTCATTTAGGTGTTGGGAAGAAGAAGCATGGGGACAGTGGTAGTCATCACTCGGATTCATTTCATTACTTGGATGGAGGTGGGTCACAATCAGGGGAAGAAATTAGCTCTGGCATGGTTGGAATGTACATGTCCTCTTCTTCACACCCTATAACAGCTCCTTCACCGCTCTCTGGCCTTCCAGAATTCTCTCACTTGGGTTGGGGTCACTGGTTTACACTGAGGGATCTTGAACTTGCTACGAACCGTTTTTCAAAAGAAAATGTAATTGGTGAGGGTGGGTATGGAGTTGTTTACCGGGGACAGTTGATCAACGGGACTCCAGTGGCAGTTAAAAAGATACTCAATAACGTTGGTCAAGCTGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGTCATGTCCGACATAAAAACTTGGTTCGACTTTTGGGGTACTGCATTGAGGGGACTCACAGGATGCTAGTCTACGAGTATGTCAATAATGGAAACTTAGAGCAATGGCTTCATGGAGCAATGCGACATCATGGATATCTTACCTGGGAAGCACGTATTAAAATTCTCCTTGGCACAGCTAAGGGGCTTGCATATTTGCATGAAGCAATTGAGCCAAAGGTGGTACACCGAGATATCAAGTCCAGCAACATATTAATTGATGACGACTTTAATGCCAAGGTTTCTGATTTTGGCCTGGCCAAGCTTCTTGGTTCTGGGAAGAGTCATGTTGCAACACGAGTTATGGGAACCTTTGGATATGTGGCTCCTGAATATGCAAATACTGGTCTTCTAAATGAAAAAAGTGATGTTTATAGCTTTGGTGTTGTGCTATTGGAAGCAATTACTGGAAGAGATCCAGTTGACTACGGACGTCCAGCACAGGAAGTTAATATGGTTGATTGGCTGAAGACGATGGTTGGAAACAGGAGATCAGAAGAAGTGGTGGACCCAAACATTGAGGTGAAGCCATCTACCAGAGCTTTGAAACGGGTGCTCTTAACTGCTTTGAGATGTGTAGATCCAGATTCCGAGAAAAGACCCAAGATGGGCCAAGTTGTACGTATGCTTGAGTCAGAGGAGTACCCTTTAGCAAGAGAGGATCGTAGGCACCGAAGAAATCGTGGGGTTAACTCAGAAATTGAATCACATAAGGATAATTCTGACACAGATGGCAGTGACATTCAGGGCTCTAGATCAGAAAGCGGAAGGTAA 1521 0.4372 MGADLKAELSGKTFVFGLKVWQIIGIAVGLFIVVILCVLPFCLTSRKKTRRARNRIPASHIPPVSKEITEVRVEQVPANGFVPREGILLTIHDKSSDKESDKVMLHLGVGKKKHGDSGSHHSDSFHYLDGGGSQSGEEISSGMVGMYMSSSSHPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKENVIGEGGYGVVYRGQLINGTPVAVKKILNNVGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKGLAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGSGKSHVATRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPAQEVNMVDWLKTMVGNRRSEEVVDPNIEVKPSTRALKRVLLTALRCVDPDSEKRPKMGQVVRMLESEEYPLAREDRRHRRNRGVNSEIESHKDNSDTDGSDIQGSRSESGR* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0737 506 Gene3D Transferase(Phosphotransferase) domain 1 264 476 - -
Gso20g0737 506 ProSiteProfiles Protein kinase domain profile. 188 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g0737 506 Gene3D Phosphorylase Kinase; domain 1 170 263 - -
Gso20g0737 506 SUPERFAMILY Protein kinase-like (PK-like) 172 467 IPR011009 -
Gso20g0737 506 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Gso20g0737 506 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 502 - -
Gso20g0737 506 MobiDBLite consensus disorder prediction 462 506 - -
Gso20g0737 506 MobiDBLite consensus disorder prediction 112 132 - -
Gso20g0737 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Gso20g0737 506 MobiDBLite consensus disorder prediction 462 494 - -
Gso20g0737 506 SMART serkin_6 188 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g0737 506 Pfam Protein kinase domain 189 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g0737 506 CDD STKc_IRAK 194 460 - -
Gso20g0737 506 PANTHER OS01G0323000 PROTEIN 3 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0737 Gso-Chr20 36664933 36669773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0737 17 462 Trihelix Transcription Factor Family AT1G70460 40.355 1.04e-93 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Gso20g0737 Pkinase 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0737 - - gmx:100778269 974.156