Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0725 ATGGCCGGTGACGGTGCAGCTACATGCATAGACATCCTCCTTGCCATCATTCTCCCTCCTCTTGGAGTCTTTCTCAAATATGGCTGCCAGGTGGAGTTCTGGATTTGTTTGGTGCTGACCCTTTTTGGTTATATACCTGGAATTATCTATGCTGTCTATGCTATCACCAAGTGA 174 0.4655 MAGDGAATCIDILLAIILPPLGVFLKYGCQVEFWICLVLTLFGYIPGIIYAVYAITK* 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0725 57 Pfam Proteolipid membrane potential modulator 9 55 IPR000612 GO:0016021
Gso20g0725 57 PANTHER LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN 1 57 - -
Gso20g0725 57 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 57 IPR000612 GO:0016021
Gso20g0725 57 ProSitePatterns Uncharacterized protein family UPF0057 signature. 13 28 IPR000612 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0725 Gso-Chr20 36506820 36508114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0725 5 57 RCI2 Gene Family AT3G05890 75.472 2.18e-25 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0725 - - gmx:100306281 114.005