Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0716 ATGAGAACGGGGAACCTCTTCTGGCTTGGCATTGTTGCAGCACTTGTTTTCAGTTTCTGGGTTGATGCCTTTTCAGCCAATCAATATTACCCCCACCACCACTTCAATGAAACCGAGTTCTCTTCGTTGGAGTCTCAAGAACAGGCACATTCATCCCTCCTTGGGAGGACTCCTCTCATGGTTGGACTCACCCTTATTCAAAGTGCTGCTGCCAAAGGAGCAGTTTGCTTGGATGGAACATTGCCTGGTTATCATTTGCATCGGGGATATGGATCAGGAGCAAACAGCTGGGTCGTTAATTTAGAGGGAGGTGGGTGGTGTAATGACGTTAGATCATGTGTTTATCGCAAGAAAACACGGCGTGGGTCATCAACATTCATGGAAAAACAGATACCTTTTACAGGAATATTAAGCAACAGTGCTGAAGATAATCCAGATTTTTTCAACTGGAACAGAGTGAAAATTCGTTATTGTGATGGTGCCTCTTTTGCTGGGGATGGTGAAGATAAGGTGGCGCAACTGCAATTTAGAGGACAGCGTATTTGGTTGGCTGCAATGGAAGATTTGAAGTCAAAGGGAATGCGATTTGCCAAGCAGGCTCTTCTTTCTGGATGCTCGGCTGGTGGTCTGGCTACTATTATACACTGTGATGAATTCAGAGGTTTTTTCCCAGAGACTACCAAAGTGAAGTGTCTTAGTGATGCAGGATTATTTCTTGATGCGATTGATGTCTCCAGGGGACATACCATCAAGAATTTATTCAGTGGTGTTGTAAGGCTACAGGGAGTGCAAAAGAATCTGCCGCACTTTTGTACTAATCACCTTGATCCCACTTCGTGCTTCTTCCCTCAGAATTTGATTGCCGGTATTAGAACCCCACTATTCATTCTTAATACAGCCTATGACTCATGGCAGGTCCAAACAAGCTTAGCTCCTTCATCAGCAGATCCCCATGGCTTTTGGCATGATTGTAGATTAAATCATGCTAAATGTACTTCTTCACAAATCCAATATTTGCAAGGATTCAGGAATCAAATGCTGAATGCTATTAAAGGCTTCTCAAGATCACCTCAAAATGGATTGTTCATAAATTCATGTTTTGCTCACTGCCAATCTGAGAGGCAGGATACATGGTTTGCTGACAATTCTCCTGTCATTGGGAACAAGGCAATTGCTCTTGCTGTTGGAGACTGGTATTTCGACCGAGCAGTTGTTAAGGCCATTGATTGTCCTTACCCTTGTGATAATACATGTCACCATCTTGTCTTCAGATGA 1275 0.4345 MRTGNLFWLGIVAALVFSFWVDAFSANQYYPHHHFNETEFSSLESQEQAHSSLLGRTPLMVGLTLIQSAAAKGAVCLDGTLPGYHLHRGYGSGANSWVVNLEGGGWCNDVRSCVYRKKTRRGSSTFMEKQIPFTGILSNSAEDNPDFFNWNRVKIRYCDGASFAGDGEDKVAQLQFRGQRIWLAAMEDLKSKGMRFAKQALLSGCSAGGLATIIHCDEFRGFFPETTKVKCLSDAGLFLDAIDVSRGHTIKNLFSGVVRLQGVQKNLPHFCTNHLDPTSCFFPQNLIAGIRTPLFILNTAYDSWQVQTSLAPSSADPHGFWHDCRLNHAKCTSSQIQYLQGFRNQMLNAIKGFSRSPQNGLFINSCFAHCQSERQDTWFADNSPVIGNKAIALAVGDWYFDRAVVKAIDCPYPCDNTCHHLVFR* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0716 424 Pfam Pectinacetylesterase 58 403 IPR004963 GO:0016787
Gso20g0716 424 PANTHER PECTIN ACETYLESTERASE 5 423 - -
Gso20g0716 424 PANTHER NOTUM-RELATED 5 423 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0716 Gso-Chr20 36329360 36334540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0716 60 424 Carbohydrate Esterase AT1G57590 73.699 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0716 K19882 - gmx:100793403 893.649