Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0697 ATGGATTCCTTAGAAGACAGCGGCTGTTGGGATTTTCTCGATTACTCTTTCATCGATCAAGCGCCCCCTGATTTCCTTTGGTCCAATAACAATAATAGTGTGAGCACCGAAATTGACATTCCAGGTGATGCTGTTGCTTGTCAAGAGAACACCAAGAAGAGGTTCTGTGACTTGAGCTCTGTTTTGGAGCCAGGGAGACCTGTGAGAACAGATAAACCAGCTATACTTGATGATGCTATCAGAGTCTTGAGCCAACTTAAAACCGAAGCCCAGGAGCTCAAAAAAACAAATGAAAAATTACTAGAGGAAATAAAATGTTTAAAGGCAGAGAAAAACGAACTACGCGAAGAGAAACTTGTTCTGAAAGCAGATAAGGAAAGGATTGAGAAGCAGTTGAAGGCCTTGCCCGTTGCACCAGCAGGGTTTATGGCTCCACCTGTAGCTGCTGCTGCTGCAGCATATCAAGCAGGGGTGAACAAGATGGCCGTATATCCAAACTATGGCTACATCCCAATGTGGCAATATCTTCCTCAATCTGTCAGAGACACATCACATGATCATGAGCTCAGGCCTCCAGCTGCATAG 585 0.4479 MDSLEDSGCWDFLDYSFIDQAPPDFLWSNNNNSVSTEIDIPGDAVACQENTKKRFCDLSSVLEPGRPVRTDKPAILDDAIRVLSQLKTEAQELKKTNEKLLEEIKCLKAEKNELREEKLVLKADKERIEKQLKALPVAPAGFMAPPVAAAAAAYQAGVNKMAVYPNYGYIPMWQYLPQSVRDTSHDHELRPPAA* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0697 194 Coils Coil 76 131 - -
Gso20g0697 194 PANTHER BHLH TRANSCRIPTION FACTOR 48 194 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Gso20g0697 194 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 50 113 IPR036638 GO:0046983
Gso20g0697 194 Gene3D - 48 119 IPR036638 GO:0046983
Gso20g0697 194 PANTHER TRANSCRIPTION FACTOR BHLH104 48 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0697 Gso-Chr20 35998221 36003680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0697 42 194 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 64.557 4.70e-64 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0697 - - gmx:100787583 339.732