Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0677 ATGGCAACAAGCGAAGAAGTGGTTGCGGCGGCGCCGGAGGCAGCCGCGCTGGAGGCAGGGCTGAAGCACAAACTGGAGAGAAAATGGACGTTTTGGTGCGACAACCAATCCAAACCCAAACAGGGCGCTGCTTGGGGTACCTCTCTTCGCAAGGTCTACACCTTCGACACCGTTGAAGAGTTCTGGTGTTTGTATGATCAGGTATTCAAGCCCAGCAAGTTGCAAATCAATGCGGATTTTCACTTGTTCAAGACTGGGATTGAGCCTAAATGGGAAGATCCTGAGTGTGCCAATGGAGGAAAGTGGTCAGTCACCAGCAACAGCGGCAGGAAGGCTAACCTTGATAACATGTGGCTTGAAACTATGATGGCTTTGATTGGGGAGCAATTTGAGGATGCCGAGGACATATGTGGTGTTGTTGCGAGTGTGCGCCAGTGGCAGGACAAACTTTCGTTGTGGACAAAGACAGCGGCAAATGAGGCTGCCCAGATGAGCATTGGAAGGAAGTGGAAGGAAATCATAGATGTTAACGACAAGATAACATACAACTTTCATGATGATTCTAGAACCAAAGGAGCACCAAAGGGTCGATACGCCGTATAA 603 0.4959 MATSEEVVAAAPEAAALEAGLKHKLERKWTFWCDNQSKPKQGAAWGTSLRKVYTFDTVEEFWCLYDQVFKPSKLQINADFHLFKTGIEPKWEDPECANGGKWSVTSNSGRKANLDNMWLETMMALIGEQFEDAEDICGVVASVRQWQDKLSLWTKTAANEAAQMSIGRKWKEIIDVNDKITYNFHDDSRTKGAPKGRYAV* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0677 200 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 10 190 IPR001040 GO:0003723|GO:0003743|GO:0006413
Gso20g0677 200 ProSitePatterns Eukaryotic initiation factor 4E signature. 79 102 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Gso20g0677 200 Gene3D RNA Cap, Translation Initiation Factor Eif4e 15 200 IPR023398 -
Gso20g0677 200 PANTHER BNAA08G29940D PROTEIN 10 190 - -
Gso20g0677 200 SUPERFAMILY eIF4e-like 13 193 IPR023398 -
Gso20g0677 200 Pfam Eukaryotic initiation factor 4E 24 182 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0677 Gso-Chr20 35014686 35025817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0677 1 200 Eukaryotic Initiation Factors Gene Family AT5G35620 62.927 2.96e-85 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0677 K03259 - gmx:100781892 404.06