Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0672 ATGTTGCAGGATGTTGTCCACCCCTCAACACCGGCTGAGCAACTCCCCATTGATGAGATTTCAGGCCCGATTAGTGCTCGAATTTTCGAACTTTGCGACCCCGATTTCTTCCCACACACACTGCAAAATTCTGAGGTTACCTCCAGCTCAAATTGTTGCCATGAAGAGAAGTCCTCATATGCCACAACCATATCTCCACCTTTAGATGTAGTAGACAACAATAAGTTCAATATCAATAGCAATAGCAGCAACATAGTCACCACTACCTCATCTAGCACTACCACAACCAGCACCACAACCAACAACAACAACAACAACAACAACAACAACAACAACGCAACGAACGGCAATAATCTTTCTATCTTCTTTGACACTCAAGATGAAATTGACAATGACATCTCAGCCTCCATAGACTTCTCATCATCTCCATCTTTTGTCGTTCCACCACTTCTCCCAATCTCAACTCAGCAGGATCAGTTTGATTTCCCTTCAGCTCAGCCACAGGTGCAACTATCAACAGCAGCAGGTTCAATTTTGACGGGCCTCTCTCACTACCCTACAGATCCTGTGATTGCACCCCTTATTGGAGCTCCGTTACCATCTGTTTTTGATGATGATTGCATATCTTCCATCCCTTCTTATGTGCCTCTCAACCCTTCATCACCCTCTTGCTCTTATCTCAGTCCTGGCATAGGAGTGTACATGCCACCTCCTGGTTCCCTTAACACTGCCTTATCTGCTGACAGTTCTGGATTGTTTGGTGGGAACATTCTACTGGGGTCTGAACTGCAGGCACATGAATTGGACTACCAGGGAGAAAATGGTGGAATGTATTGTACAGATTCAATTCAAAGGGTGTTTAACTCCCCAGACCTTCAGGCACTTGGTAATGAGAGTCAGAAACTTGTAGCTGGGGCTGGAAGCTCTGCCACTTTGGCACCAGAAATCTCACACTTGGAGGACTCTACCTTGAAGGTTGGAAAACTCTCTGTTGAGCAGAGGAAGGAAAAGATTCATAGATACATGAAGAAGAGAAACGAAAGAAATTTCAGCAAGAAAATCAAGTATGCTTGCCGCAAAACTTTGGCGGATAGCCGGCCCCGGGTTAGAGGAAGGTTTGCAAAGAATGATGACTTTGGAGAGAGCCATAAACAAGGAAGTAGCAATCATGAAGATGATGATGAAGAGATAATTGTGAAAGAAGATGATGATATGGTTGATTCCTCAGATATCTTTGCACATATCAGCGGAGTGAACTCTTTCAAATGCAACTATTCCATCCAGTCCTTGATTTGA 1296 0.4421 MLQDVVHPSTPAEQLPIDEISGPISARIFELCDPDFFPHTLQNSEVTSSSNCCHEEKSSYATTISPPLDVVDNNKFNINSNSSNIVTTTSSSTTTTSTTTNNNNNNNNNNNNATNGNNLSIFFDTQDEIDNDISASIDFSSSPSFVVPPLLPISTQQDQFDFPSAQPQVQLSTAAGSILTGLSHYPTDPVIAPLIGAPLPSVFDDDCISSIPSYVPLNPSSPSCSYLSPGIGVYMPPPGSLNTALSADSSGLFGGNILLGSELQAHELDYQGENGGMYCTDSIQRVFNSPDLQALGNESQKLVAGAGSSATLAPEISHLEDSTLKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGESHKQGSSNHEDDDEEIIVKEDDDMVDSSDIFAHISGVNSFKCNYSIQSLI* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0672 431 MobiDBLite consensus disorder prediction 369 394 - -
Gso20g0672 431 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 17 431 - -
Gso20g0672 431 MobiDBLite consensus disorder prediction 369 395 - -
Gso20g0672 431 Pfam CCT motif 334 376 IPR010402 GO:0005515
Gso20g0672 431 MobiDBLite consensus disorder prediction 87 113 - -
Gso20g0672 431 ProSiteProfiles CCT domain profile. 334 376 IPR010402 GO:0005515
Gso20g0672 431 PANTHER CCT MOTIF FAMILY PROTEIN 17 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0672 Gso-Chr20 34818451 34823204 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0672 334 390 C2C2-CO-like Transcription Factor Family AT5G57660 48.387 9.38e-12 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso20g0672 CCT 5.8e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0672 - - gmx:100793417 746.888