Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0654 ATGCAGAGGACTACCAAAACTATTGAGCAATACCATCGTAGCTCTTTTACTCCTCAAGACGAACACGTTGAATGTGAAACTCAGAGCTGGTACCAAGAGGTGTCAAAGCTAAAGGCAAAGTATGATTCTCTTCAAAGGACCCAGAGGCATTTGCTTGGGGAAGATGTTGGACCATTGAACATAAAGGAGTTGCAGAATCTTGAGAAACAGCTTGAAGGGTCTTCAGCACAACCAAGGCAAAGGAAGATGTGTCTGAGGATGTTCGTGTCTACACTGACAATGAGAACAAGTTCAAGATTGAGATTCCCCAAGGTAAATTGA 321 0.4299 MQRTTKTIEQYHRSSFTPQDEHVECETQSWYQEVSKLKAKYDSLQRTQRHLLGEDVGPLNIKELQNLEKQLEGSSAQPRQRKMCLRMFVSTLTMRTSSRLRFPKVN* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0654 106 PANTHER MADS-BOX TRANSCRIPTION FACTOR 6 5 86 - -
Gso20g0654 106 ProSiteProfiles K-box domain profile. 27 106 IPR002487 GO:0003700|GO:0005634|GO:0006355
Gso20g0654 106 Pfam K-box region 26 85 IPR002487 GO:0003700|GO:0005634|GO:0006355
Gso20g0654 106 PANTHER SERUM RESPONSE FACTOR HOMOLOG 5 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0654 Gso-Chr20 34265984 34271492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0654 7 87 MADS-box Gene Family AT2G45650 52.439 1.84e-19 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0654 K09264 - gmx:100784410 166.007