Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0629 ATGACACCGGCAAGAAAGAAAATCGTGAAGTTCAATGCAACAGAACTAATCATCTCAATATATGCACTGAAAATTGGAATGACACGCGTTGTCCAGCTCTCTTTGTTGGGTTCAATATTGTCCAATATGTTACTGGTGCTTGGGTGTGCATTCTTATGTGGTGGGATTGTTAATCACGAGAAGGAGCAAGTGTTTAACAAGGCAGCTACTTCCGTGAACTCAGGATTATTGCTAATGGCAGTCATGGGCATACTTTTTCCTGCTGTTCTACACTACACTCACAGTGAGGTCCATGTTGGGAAGTCAGAGTTGTCACTTTCAAGATTCAGCAGCTGCATTATGCTTGTGGCTTATGTTGCATACCTATTTTTTCAGTTAAAAAGTCAAAGAAATCTCTACGTCTCTGTGAACGAGGGAGCATCTATGGCATGGGAAATTCCAGTAGCATTTATTAGTGTCATATTGCTTCCACTAGTGGGGAATGCAACTGAACATGCCAGTGCTATAATGTTTGCCATGAAAGATAAACTTGACATTTCCTTAGGAGTAGCAATTGGGTCATCCACACAGATATCTATGTTTGTGGAAGGAACTGCTAATTACTTCAAAGGACTAATGCTTATTCTTTGCTATCTGATAGTGGCAACCAATTTTTATGTACATCCGGCAGGTTGGTTGTTCTACCTATTGATGATAGGCACACACATTTACTTGGCAGCCGGCAGGTTGGTGAAAATGCTTTTTTTGTATGATGTTTGA 759 0.4058 MTPARKKIVKFNATELIISIYALKIGMTRVVQLSLLGSILSNMLLVLGCAFLCGGIVNHEKEQVFNKAATSVNSGLLLMAVMGILFPAVLHYTHSEVHVGKSELSLSRFSSCIMLVAYVAYLFFQLKSQRNLYVSVNEGASMAWEIPVAFISVILLPLVGNATEHASAIMFAMKDKLDISLGVAIGSSTQISMFVEGTANYFKGLMLILCYLIVATNFYVHPAGWLFYLLMIGTHIYLAAGRLVKMLFLYDV* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0629 252 Gene3D - 11 240 IPR044880 -
Gso20g0629 252 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 12 138 - -
Gso20g0629 252 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 136 195 - -
Gso20g0629 252 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 196 221 - -
Gso20g0629 252 Pfam Sodium/calcium exchanger protein 140 234 IPR004837 GO:0016021|GO:0055085
Gso20g0629 252 Pfam Sodium/calcium exchanger protein 12 126 IPR004837 GO:0016021|GO:0055085
Gso20g0629 252 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 196 221 IPR004713 GO:0006812|GO:0008324|GO:0016021
Gso20g0629 252 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 136 195 IPR004713 GO:0006812|GO:0008324|GO:0016021
Gso20g0629 252 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 12 138 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0629 Gso-Chr20 32969067 32974175 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0629 12 221 Antiporters AT3G13320 56.803 5.41e-103 304