Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso20g0611 | ATGGAAGCCATTGGTTCTGTGGATGACCTCTTGGATTTTTCATTAGACATAGGTGAGAAAGATGATGATGACGACAAACCTAGGAAAGCCTGTCCTTCACTTAACTCAAAATGCGGAGATCCATCATTGTTTAACCCATTGGTCCAGGTTGATCCAAACCATTCATTTTCTGAGTTTGCAGAAGAGGAGCTTGAATGGCTATCCAACAAAGATGCATTTCCTTCTGTTGAAACGTTTGTTGACCTATCATCTATTCAACCTGGCACAACCAAGAACCAGAAAACAGTACTTGAGTGCAGCACAGGCAGTAGCAACAGTAATAACAGCACTAACAGTATTTCCCTCCTAAACAGCTGTGATCGCCTTAAGGTCCCAGTCCGTGCACGGAGCAAGAGTCGCAGTAGGCGTCGCCCTGGCCTTGCTGAGAATTCTACACAGCAAGTCTGGTGGAGACAACCAAGTAATGAAACTTCCAAAGCAGACGAAGGGATGAAAATCTCACCCATTGGGAGAAAATGTCAGCACTGTGGAGCTGAAAAAACTCCACAATGGCGGGCAGGTCCCCTTGGGCCAAAAACACTTTGTAATGCATGTGGGGTTAGGTTTAAGTCTGGGCGGCTCGTGCCTGAGTACCGTCCTGCAAGTAGCCCAAGTTTTCGTAGTGATTTGCATTCTAATTCCCACAGGAAGATAGTAGAGATGAGGAAGCAGAAGCAAATGGGAATGGGATAA | 732 | 0.459 | MEAIGSVDDLLDFSLDIGEKDDDDDKPRKACPSLNSKCGDPSLFNPLVQVDPNHSFSEFAEEELEWLSNKDAFPSVETFVDLSSIQPGTTKNQKTVLECSTGSSNSNNSTNSISLLNSCDRLKVPVRARSKSRSRRRPGLAENSTQQVWWRQPSNETSKADEGMKISPIGRKCQHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSPSFRSDLHSNSHRKIVEMRKQKQMGMG* | 244 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso20g0611 | 243 | ProSitePatterns | GATA-type zinc finger domain. | 173 | 198 | IPR000679 | GO:0006355|GO:0043565 | |
Gso20g0611 | 243 | ProSiteProfiles | GATA-type zinc finger domain profile. | 167 | 203 | IPR000679 | GO:0006355|GO:0043565 | |
Gso20g0611 | 243 | PANTHER | GATA TRANSCRIPTION FACTOR 1 | 7 | 239 | - | - | |
Gso20g0611 | 243 | SMART | GATA_3 | 167 | 217 | IPR000679 | GO:0006355|GO:0043565 | |
Gso20g0611 | 243 | Gene3D | - | 169 | 240 | IPR013088 | GO:0006355|GO:0008270 | |
Gso20g0611 | 243 | MobiDBLite | consensus disorder prediction | 126 | 163 | - | - | |
Gso20g0611 | 243 | Pfam | GATA zinc finger | 173 | 206 | IPR000679 | GO:0006355|GO:0043565 | |
Gso20g0611 | 243 | MobiDBLite | consensus disorder prediction | 139 | 161 | - | - | |
Gso20g0611 | 243 | CDD | ZnF_GATA | 172 | 220 | IPR000679 | GO:0006355|GO:0043565 | |
Gso20g0611 | 243 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 169 | 230 | - | - | |
Gso20g0611 | 243 | MobiDBLite | consensus disorder prediction | 16 | 35 | - | - | |
Gso20g0611 | 243 | PANTHER | GATA TRANSCRIPTION FACTOR | 7 | 239 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso20g0611 | Gso-Chr20 | 32161190 | 32164920 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso20g0611 | 52 | 243 | C2C2-Gata Transcription Factor Family | AT3G24050 | 43.534 | 1.98e-48 | 159 |