Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0604 ATGGGGAAGCAAATTCGCGAGAAAGAATGTGCATTGCCAAATCGAAATAGTCATCATACTCATCCAGGACGAGTATGGGGAATTCTTCACGTTATAAAGTACCATCATTGGCGTCAGGTCAAGAGAAGGCTTACACGCAGGAGGCATGGTGGCGAAAGACCCGATGCTAGAGCTAAAATTCCAGGAACTTCTGATGATTCAGGGGTTCACTCTATTCCAGAACATTATAAGCCACATACAGAACTATCTAATGTTGAAGAAAAGCCAGTATACTCCTCTCCACCAGCCAAAATTACTATCAAATCCCGATTAAGATCACTTCTTAATGAAGATATATACAGAAGGAAGGGTCGACACAAGAGAAGCTCAACCTGCCCTGCAAAGTCGCAACTAACTCATGCCAATTCTGTTCACAACTTAGAGGTTGATCTACTTGGTGAATTGTTACTAACTGTTCAGAGCCCTGACCCAGTCCTAGAAACCTTTCAAAACCATCTTGCTGCTGGTACATTGGATGAGTTGACACCAGTTTTATATGAGAAACCAATTGCCAACAATGACAAATGTGTAGATTGTGGAACAATGTTTTCTAAAGACATTTTGGAACATAGCAAGATTCATAAGCACTTGTGCTCTCCTAGTCAAGGTGGTCCTGAAGAGAAGTTGATGAATGCACAGATACTTACAACTGATGCTTCACCCCATCTTGTCAAGGACTTTCTTGATGCATTGGATGTGATCAACACAAACAAGGACTTCCTATTAGAATATATACAGGATCTAGGCTCTCCTTTGCCATTCCACACTCATGATCAACAATCTTTCAACGGTAAACAGAGACGAGCCAAATCTCTCTCATTTCCTGTATCTGCCTCATCATCAGGAAGCCAAGATTCTGTTTCAGGCCAACTCATAAATCAAATGGTAGATTATTGGTTGGATTCAGAAGAAGAGAAGTTGCAAAATCAAAGTAACATGCAAAATACGAGCATGGATGAGTCCTCAGAAGATTCTCACCAACAGTCCTTACCATCAAGTTTTTCAAATAATTATGATCAATGGGGTGAAAGAGGTACTAATTCTCCATCAGTTTCATCCCATGTTCCCAACAATGTGAAAACTAGGCATTTCAGGGATCTTAGAAAGAAGATGAAGCACATAATTGAAGATGGAAGAAATGAAAAGCATCGCATTACCATGGATGCTATACTTGACAAAATTCCTTGTGGAAAGAGGCTCACAAAAAAAGTAAAGAAGTTTATCCACGTCAAATCCAAAGACCCCACAATTAAATGGGAAGATGAAGACCGTGCAACCAGCGGTTTTGGTAGCCATCTCTCTTCTAATTCCTTCAACAAGCATCAACCATCACCCATGAGGACTTCATTTCTAAAAGATTCAGCTGGTAGATATTCTCAGTTGTATCATCAGACTTGTTTTAACAGTGATGCCAAGTATCCTAAGGCTGAGAACTTAAGATTGAGAACAGAAGAGAGAAATTCAATATTAAAGACCCCAAAATCCTTTAAAAGGTTTCTTTCAATGCCTAATTTAAAATCTTACTTTCACCAGAATGAGGAGCTGCCTTTACCTTTATCCCCCCAAAATTCAATCAAGAATTTTGGAGATAGAACAACAAGCACAAATGTCACTGATCAGCAACAAAGAAGTTTTGACAATAATGATGATTCAATGAGTCAAATTTTACCACCTACATTTGCTGATAATATAAATCAAGACAGCAATTTGAATGCTGACCAAAAGCAACTTCTTGCCAGGAGTGCTTCAAAATCAAGATTAGATTTTAGTACTGAGGCAGAGGCAGATAAGAGCATAGGAATTGAAGGTTTAGGTGACTTGAGAGACAGTGAACAAGACATTGGAGCTGAAACAGAATCTATTGTGCCAGTGGAAGCAAACTCAGTCTTCTCTTCTGACACTAGCTTCCTAGATTTTACATTTGATCTCGAGAACTTAAACATACAGGAAGAAGAATCAGACACAGAAATAAACCCAGGGCAAGGTGATGATGGATTGGATGATATGGCTGAGCACCAAGAGGCTAAAGAGGATCACCCTGAGAAGGTTGAGAATTTTCAAAACCTTGGAACTCTAAGCAAGCGTTTCAACTATGAAATTCCAAGTATTGAAGTGGATCCAAGTAATGAAGCTACATTTAATTATGTGAGAAAGGTTTTAGAGCTTTCTGGGTTCACTGGCCATGATTCCCTTGGGATATGGTATTCTGATAACCAACCACTTGATCCTTCAATGTATGAAGAATTGGAGGGGTGCTTGCTTCTTGATCCTGATTGTTCTCGTAATAGTGAAGGTGGAGAATGTAATCATCATCTGCTTCTGTTTGATATAATCAATGAAGGGTTGCTGGAGATTTTTGGCAGATCTTACAACTATTATCCAAGACCATTGTCTTATCTCTCCCATGTTCACCCACTACCATCAGCAGAAAATGTTCTCTGTAAAGTGTGGACACTCATTAGCTGGTATCTGATGAACTCAACAACATCTGAGCTTTACCTATCATTGGATTATTATGTGAGCAAAGATCTTGCAAAATATGATGGGTGGATGAATCTCCAATTTGATTCTGAATGTGTGGGGCTTGAGCTAGATGACTTGATTTTTGAAGATCTATTGGAGGAAATAATCTCCACCTAA 2679 0.3923 MGKQIREKECALPNRNSHHTHPGRVWGILHVIKYHHWRQVKRRLTRRRHGGERPDARAKIPGTSDDSGVHSIPEHYKPHTELSNVEEKPVYSSPPAKITIKSRLRSLLNEDIYRRKGRHKRSSTCPAKSQLTHANSVHNLEVDLLGELLLTVQSPDPVLETFQNHLAAGTLDELTPVLYEKPIANNDKCVDCGTMFSKDILEHSKIHKHLCSPSQGGPEEKLMNAQILTTDASPHLVKDFLDALDVINTNKDFLLEYIQDLGSPLPFHTHDQQSFNGKQRRAKSLSFPVSASSSGSQDSVSGQLINQMVDYWLDSEEEKLQNQSNMQNTSMDESSEDSHQQSLPSSFSNNYDQWGERGTNSPSVSSHVPNNVKTRHFRDLRKKMKHIIEDGRNEKHRITMDAILDKIPCGKRLTKKVKKFIHVKSKDPTIKWEDEDRATSGFGSHLSSNSFNKHQPSPMRTSFLKDSAGRYSQLYHQTCFNSDAKYPKAENLRLRTEERNSILKTPKSFKRFLSMPNLKSYFHQNEELPLPLSPQNSIKNFGDRTTSTNVTDQQQRSFDNNDDSMSQILPPTFADNINQDSNLNADQKQLLARSASKSRLDFSTEAEADKSIGIEGLGDLRDSEQDIGAETESIVPVEANSVFSSDTSFLDFTFDLENLNIQEEESDTEINPGQGDDGLDDMAEHQEAKEDHPEKVENFQNLGTLSKRFNYEIPSIEVDPSNEATFNYVRKVLELSGFTGHDSLGIWYSDNQPLDPSMYEELEGCLLLDPDCSRNSEGGECNHHLLLFDIINEGLLEIFGRSYNYYPRPLSYLSHVHPLPSAENVLCKVWTLISWYLMNSTTSELYLSLDYYVSKDLAKYDGWMNLQFDSECVGLELDDLIFEDLLEEIIST* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0604 892 MobiDBLite consensus disorder prediction 663 696 - -
Gso20g0604 892 MobiDBLite consensus disorder prediction 269 300 - -
Gso20g0604 892 MobiDBLite consensus disorder prediction 678 696 - -
Gso20g0604 892 Pfam Protein of unknown function (DUF3741) 220 260 IPR022212 -
Gso20g0604 892 MobiDBLite consensus disorder prediction 319 371 - -
Gso20g0604 892 Pfam Domain of unknown function (DUF4378) 726 888 IPR025486 -
Gso20g0604 892 MobiDBLite consensus disorder prediction 43 92 - -
Gso20g0604 892 MobiDBLite consensus disorder prediction 543 564 - -
Gso20g0604 892 PANTHER PROTEIN TRM32 1 892 IPR044257 -
Gso20g0604 892 MobiDBLite consensus disorder prediction 319 374 - -
Gso20g0604 892 MobiDBLite consensus disorder prediction 70 84 - -
Gso20g0604 892 PANTHER TRM32-LIKE PROTEIN (DUF3741) 1 892 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0604 Gso-Chr20 31717093 31721560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0604 1 882 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 29.576 3.00e-90 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0604 - - gmx:102667499 1734.92