Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0581 ATGGATGATATGGACATGGATATTCCCCTCCCCGAAGAACTCGAATTTCTCGAATCAAATTCTCATTTTGCCGAACAAGAACAAGAAGAAGAAGACCATCACTATTACTTCCCAGACCTAGACCCCGCCGCCGAATTTCTTGAATCAAATTCTCAACAATCGCCGTCGCCGCAAGATCTCGCGGTTCCTTCGGCGGAGCCCGAATTCAACGGCCACAAGCGATCGCGTCCGCCTTCTCCAGAAGAGAAGAGAGCGAAGGTTAGGGTTGCCGTCGAGGAGGATTTCGCCGTGGCCGACGAGGACTGGCCCCGGTACTCTCCTCCGCCGGCTCCTCCGGAGCAGGCGATGGAGGAAATGATGTTCGAGAAGGAGAAGACACTGTCGAGATTCGCCTCGGAGATTGACGGCGAGTGCATGCCGATCACCGCGCCCAGCGGCAACAGGGTTTACGCGAAGCTGAACCGGTTCCAAGGAGAGGAGCGCGTCACGAAGCTTGATTACAATGGATATTCTGCTGAGCTTAGTTCAGAACCAGTTAATGTTATACTTGAGAGGTTGGAGCAAGAGGCTTTCGCTAAGGCCTTGGAAGCTAGTTCTGAAGGCCAAAGTGTTCTAGACATTCCTGAAGCACAAACGGTTCATGAGCGACTTTGGGTTGATAAATATGCTCCAAAATCATTTACCGAGCTTCTCAGTGATGAACAGACAAATCGCGAGGTACTCTTGTGGTTGAAACAATGGGATTCTATTGTGTTTGGATCTGAAATTCGAAGCACATCAGATGATGTTTTGTCATCTTTGAAACGACATTCTTCTATTGTCCACAATCAGAAACCATTGAATTCAAAGTTTCCAAGGATGAATGGAGGACCCAAATGGAGTAATGGGAGGAGGTATATAAATGCTAGAAGTATGGATGAGAGTGGTAGTTCAAAGAGTATTCAAGATGTATGGAATGCAAAGTCAAGGAATATTGGTCCTCCAGAACAAAAGATCCTTCTGCTCTGTGGATCACCAGGTCTTGGAAAAACAACACTTGCCCATGTAGCTGCTAGGCACTGTGGATATCATGTGGTGGAGGTCAATGCTAGTGATGATCGTTCAACAGCATCAATTGAAGCCAAAATCCTTGATGTGGTCCAGATGAACTCTGTCTTGTCTGACTCAAGGCCAAAGTGTCTGGTGGTGGATGAAATTGATGGAGCTCTTGGTGATGGCAAGGGTGCTGTGGAGGTTCTTTTAAAGATGATTTCTTCCGAAAGGAAGCCTGATGCTGGGAAACAAAGTTTTGGCAAAGGACAGCAGGAAAGGAAGTCATCAAAAAAGGGTTCGAAAGCAGCTTCACTTTCAAGACCTGTGATTTGCATTTGTAATGACCTATATGCACCTGCCTTAAGACCATTACGTCAGGTAGCCAAGCTGACATATATATGTAACAAGGAGGGGATGAAAGCCAGTGCAATTGCACTAACTGCTCTAGCAGAATATACAGAATGTGATATTAGATCATGCTTGAACACTCTCCAATTTCTCTCCAAGAAGAATGAGGCCCTCAATGTGTTTGATATTGGTTCTCAAGTTGTTGGCCAGAAGGACACGTCAAAGAATGTTCTAGACGTCTGGAAAGAGATATTCCACAAGAGAAGAACAAAAAAGACGGAAAGAAAATCTCATAGAGGCAAGTCCTTTGAATTTGACTCCTTGTACTCCCTTGTTTCAAACCGTGGTGATAGTAACTTGATTCTGGATGGAATTCATGAAAATGTTTTGCAGCTCAATTATCATGACCCAGTAATGCAGAAAACTGTCAAGTGCTTCGACAATCTTGGAGTTTATGATCTAATGCATCAATATATAATGCATACACAACAGATGCCCCTGTATGTATATTTGCCCCTAGTAGCAATTACTGTACATCATATAGTATCTCAAGTTCAGAAACCAAACATTGAGTGGCCAAAATCACATCAGAGATATCGTACCATGATGATGGAAAAGATGGACATTTTGAATACCTGGCACCACAAAATCCCACCGTATATTGCAAGGAACTTATCAGCTAGTTCCTTTGTTGAAGACTTAATTTCTCCATTATTACATATTTTGTCCCCACCAACTGTAAGACCGGTAGCATTTCAATTACTATCAGATAAGGAGCAGAATGATCTTGCTCAATTAGTTAGCACAATGGTATCATACACTATAACATATAAAACTTTGAAATCAGATATTCTGCCTCAAACCCAGAGGTGTGAAGTAGCTGATGGCTTGGCACTGTCTCTTGTTCCTCCTATTAGCGACTTTATAAATTTCAAGGATTATACTTCAAACCATTATGTGCTTTCTGTAGCTATGAAGCAGGTTTTGGTTCATGAGGTTGAAAAGCATAAGATTTTACAAGTTGGTAATGACAAAGCTGGGGCCTTCACAAATGGAGGGCATGAAGTTATTGAGACTGGAACTAACAACATCCCATTAGCCAATACCAGTCATGCAACTGCAGTTGATTTGAAAATTAATGAAAATCAGGCTAATGTTTTATCATGGCAATTAAATGCTAATCCAACAACAGTTTCACCAAACTTGGATTCCAATAAAATTTCACGTGCAGCAGACTGTGGGAAACTACTAAACATGGGAAATATGAAAAAACCATCCAGAAGTTCCTCAAGTTTCTTTGATAGGTTTAAAAAAGTAAATGCTAAGGGTTTACAAAGTAATGACAGATCTCCACAGGAAGAAGCTACCTTGGAGAAAGATCGATACCCTTTACTTTTTAAATTTAACGAGGGCTTTACTAATGCAGTGAAAAGGCCTGTTCGTATTCGTGAATTTCTATCCTAA 2844 0.4223 MDDMDMDIPLPEELEFLESNSHFAEQEQEEEDHHYYFPDLDPAAEFLESNSQQSPSPQDLAVPSAEPEFNGHKRSRPPSPEEKRAKVRVAVEEDFAVADEDWPRYSPPPAPPEQAMEEMMFEKEKTLSRFASEIDGECMPITAPSGNRVYAKLNRFQGEERVTKLDYNGYSAELSSEPVNVILERLEQEAFAKALEASSEGQSVLDIPEAQTVHERLWVDKYAPKSFTELLSDEQTNREVLLWLKQWDSIVFGSEIRSTSDDVLSSLKRHSSIVHNQKPLNSKFPRMNGGPKWSNGRRYINARSMDESGSSKSIQDVWNAKSRNIGPPEQKILLLCGSPGLGKTTLAHVAARHCGYHVVEVNASDDRSTASIEAKILDVVQMNSVLSDSRPKCLVVDEIDGALGDGKGAVEVLLKMISSERKPDAGKQSFGKGQQERKSSKKGSKAASLSRPVICICNDLYAPALRPLRQVAKLTYICNKEGMKASAIALTALAEYTECDIRSCLNTLQFLSKKNEALNVFDIGSQVVGQKDTSKNVLDVWKEIFHKRRTKKTERKSHRGKSFEFDSLYSLVSNRGDSNLILDGIHENVLQLNYHDPVMQKTVKCFDNLGVYDLMHQYIMHTQQMPLYVYLPLVAITVHHIVSQVQKPNIEWPKSHQRYRTMMMEKMDILNTWHHKIPPYIARNLSASSFVEDLISPLLHILSPPTVRPVAFQLLSDKEQNDLAQLVSTMVSYTITYKTLKSDILPQTQRCEVADGLALSLVPPISDFINFKDYTSNHYVLSVAMKQVLVHEVEKHKILQVGNDKAGAFTNGGHEVIETGTNNIPLANTSHATAVDLKINENQANVLSWQLNANPTTVSPNLDSNKISRAADCGKLLNMGNMKKPSRSSSSFFDRFKKVNAKGLQSNDRSPQEEATLEKDRYPLLFKFNEGFTNAVKRPVRIREFLS* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0581 947 MobiDBLite consensus disorder prediction 23 85 - -
Gso20g0581 947 Pfam ATPase family associated with various cellular activities (AAA) 333 448 IPR003959 GO:0005524|GO:0016887
Gso20g0581 947 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 216 513 IPR027417 -
Gso20g0581 947 MobiDBLite consensus disorder prediction 23 39 - -
Gso20g0581 947 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 4 946 - -
Gso20g0581 947 MobiDBLite consensus disorder prediction 423 445 - -
Gso20g0581 947 Gene3D - 215 472 IPR027417 -
Gso20g0581 947 CDD AAA 328 422 - -
Gso20g0581 947 SMART AAA_5 329 478 IPR003593 -
Gso20g0581 947 MobiDBLite consensus disorder prediction 69 85 - -
Gso20g0581 947 CDD HLD_clamp_RFC 465 523 - -
Gso20g0581 947 MobiDBLite consensus disorder prediction 46 60 - -
Gso20g0581 947 Gene3D - 473 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0581 Gso-Chr20 30469507 30554034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0581 330 528 Core DNA Replication Machinery Family AT5G22010 29.767 1.36e-12 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0581 K11269 - gmx:100791474 1823.14