Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0557 ATGGGAATGGCGGTGGCGAGTGACGATTTGCTGAGCAAGAAAGCTGCGGCGATGAGAGCGTCTCTGGAGAGAAGCCAAGCCATCACAGACGACGTCGTCTCGATTCTCGGCTCCTTCGATCACCGCCTCTCCGCCCTCGAAGCCGCCATGCGCCCCACCCAGATCAGAACACATTCTATTCGGAAAGCCCATGAGAATATTGATAGGACTTTGAAGTCTGCAGAGGCCATATTGGCTCACTTTGATCAATATTATCAGGCAGAAGCAAAAATAGTTAAAGGACCACATGAAGATGTGAAGAACTATCTTGAAGCAATTGATCAGCTGAGAAGAAACATTAGATTTTTTGGTAATAAGAAGGGTTTTAAGAATGATGATGATGTTGTCATCCGTGCCAACAATTTGATAAGCGAAGCTATTTCTAAGCTAGAAGATGAATTTAAGCGGCTATTATCATCTTACAGCAAACCTGTGGAACCTGAGTGCCTCTTTGGTTCTCTTCCAAACTCAATGCGACCTTCAGCAGCATCACCAGGTCGTGATGGTGATCCTAATGGAAAGAATCATTCTTCTGATTTCCATTCTGAGTTACATAAAAATAATGCTGATGCTGTTCAATACACACTTCCTGTTCTTATACCACCAAGAATTTTGCCGCTGCTCAATAATTTAACCCAGCAAATGGTTCAAGCTGGTCACCAACAACAGTTGCTCAAAGCATACAGAGATACCCGTTCTAAAGTATTGGAAGAAAGCCTGCAAAAGCTTGGAGTTGAAAAACTAAGCAAAGATGACGTTCAAAAGCTACAATGGGAGGTTTTGGAAGCCAAAATTGGAAACTGGATTCATTTCATGCGTATTGCTGTCAAATTGTTGTTTGCTGCGGAATGGAAAGTTTGTGATCAGATATTTGAAGGATTTGACTCACTTGGTGATCAGTGTTTCGCTGAAGTAACTGCAAACAGTATTTTCATGCTACTTAGTTTTGGAGAAGCAATTGCTAAAAGCAAGAGATCACCTGAAAAGTTATTTGTACTTTTGGACATGTACGAAATATTGCAAGAGATACATTCAGAGATTGAAATACTCTTTAAAGGCAGAGCTTGCACTAAAATAAGAGAAGCTGTAATGGGTTTGGCAATACAGCTTGCACAAACAGCCCAGGAGACCTTTGGAGATTTTGAAGAAGCAGTTGAGAAAGATGCTACAAAGACTGCAGTAACTGATGGAACTGTCCATCCTTTGACAAGCTATGTGATTAACTATGTGAAGTTTTTATTTGACTATCGATCTACCTTACACCAACTTTTCCAAGGAATTGAAGGTGATTCTTCACAGCTAGCATCTGTGACAATGCGGATATTGCAAGCTCTCCAAACCAATTTAGATGGGAAATCAAAGCACTATAGAGACCCTGCTTTGACACATCTATTTCTCATGAACAATATTCATTATATTGTCAGATCGGTTCGGAGGTCTGAAGCGAAGGACTTGTTGGGGGACGATTGGATACAACGACATAGGAAGATTGTGCAACAGCATGCCAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTTCAGTCCCTCTCTATTCAGGGCCTCATCTCATCAAGTGGTGGTGGTGGTAGTACTGCTAGTGGCGATGCGGGGAGTAGTGGTGCTTCAAGAGCAATTGTTAAAGACAGGTTTAAGACATTCAATACTATGTTTGAGGAACTTCATCAGAAACAATCTCAGTGGACAGTACCAGACACAGAGTTGCGTGAGTCTCTTATTCTTGCAGTTGCTGAAGTCTTGCTGCCTGCCTACAGATCATTTGTGAAACGTTTTGGGCCACTAGTGGAGAATGTAAAGAGTACTCAGAGGTACGTCAAATACACTGCTGAAGATCTAGAGCGAATCTTAGGTGAGTTTTTTGAAGGAAAAAACATGAATGATAACAAGCGGTAA 1953 0.4158 MGMAVASDDLLSKKAAAMRASLERSQAITDDVVSILGSFDHRLSALEAAMRPTQIRTHSIRKAHENIDRTLKSAEAILAHFDQYYQAEAKIVKGPHEDVKNYLEAIDQLRRNIRFFGNKKGFKNDDDVVIRANNLISEAISKLEDEFKRLLSSYSKPVEPECLFGSLPNSMRPSAASPGRDGDPNGKNHSSDFHSELHKNNADAVQYTLPVLIPPRILPLLNNLTQQMVQAGHQQQLLKAYRDTRSKVLEESLQKLGVEKLSKDDVQKLQWEVLEAKIGNWIHFMRIAVKLLFAAEWKVCDQIFEGFDSLGDQCFAEVTANSIFMLLSFGEAIAKSKRSPEKLFVLLDMYEILQEIHSEIEILFKGRACTKIREAVMGLAIQLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLHQLFQGIEGDSSQLASVTMRILQALQTNLDGKSKHYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWIQRHRKIVQQHANQYKRNAWAKILQSLSIQGLISSSGGGGSTASGDAGSSGASRAIVKDRFKTFNTMFEELHQKQSQWTVPDTELRESLILAVAEVLLPAYRSFVKRFGPLVENVKSTQRYVKYTAEDLERILGEFFEGKNMNDNKR* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0557 650 MobiDBLite consensus disorder prediction 165 195 - -
Gso20g0557 650 Pfam Exo70 exocyst complex subunit 280 637 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso20g0557 650 Gene3D Exocyst complex component Exo70 75 178 - -
Gso20g0557 650 Gene3D Exocyst complex component Exo70 185 650 - -
Gso20g0557 650 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 646 - -
Gso20g0557 650 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 646 IPR004140 GO:0000145|GO:0006887
Gso20g0557 650 Coils Coil 99 119 - -
Gso20g0557 650 SUPERFAMILY Cullin repeat-like 77 641 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0557 Gso-Chr20 27991995 28042072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0557 3 650 EXO70 exocyst subunit family AT5G03540 68.584 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0557 K07195 - gmx:100797989 1202.96