Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0533 ATGCCAGGCATTCCTGTTTCCACTCGTGCTACCTCAAGCCATCCAGATGCTTGTGAACATTTATCTGCGGAAGAGGAGCTTGCAGCTGAAGAGAGTCTTTCAATTTATTGCAAGCCTGTAGAACTTTACAACATTCTCCAGCGACGTGCCATGAGAAACCCATCATTCCTTCAGAGATGTTTGCACTACCGGATAAAGGCAAAGCACAAGAAGAGAATCCATATGGCAGTTTCCTTGACGAGGACTATAACTGAAAGCCAAAACGTGTTTCCCATGTCTATCTGTCTTGCAAGGCGGATTTCTGATCATGGAGCTTCAAGGCAAACCGCCATGTATCGAATTGGTCGGATTTTCATCTTCCGAAACTCCCCTGGAATTGATTTGAATACTCAGGTCCAGGCAAATTTTACACTCCCTGAAGTAAACAAGTTAGCTGAGGAAGCTAGATCTTGCTCACTTGATATCTTGTTTGTCAGCACTGCCACTGTGGGAAACTCACATCTATCATCTGGAGTCAATTCAAACTCTATGCCTTCGGATCTGAGTCATCTAGCTTTTTTTGAATCTGGAGAATACTGCCTTTGTGGGAAAGTGTCTTTAGAATCACTTTATATGGCTTGGGATTGTTTTCCGAATTTTCGTTTGGGACAGCGAGCAGAGATTATGTCAACTGTGGATTTGCTTCCGTGTATTCTGAAGTCTGATTTTCCAAATGATGATACAAGAATCTCCATTCAAGTTCCCTCTAATTTTGAGAATATGAGTACATCAAAGCAAGTACAAATCACAATTTCTGCTGAAGAGTTTGGGGCCAAAGAAAAATCTCCCTATCTTTCATATGCAGGCAGTGAAGTACCATCCTCATCATTATCTCACATGATCGGGTTGAGGGAAGGAAATGTAATGTTTAATTACAGGTATTACAATAATAAGTTGCAGAGGACAGAAGTCACCGAAGATTTCACTTGTCCATTTTGTTTGGTTAAATGCGCGTGTTTTAAGGGTCTAAGATGTCATTTGTCATCATCACATGATCTCTTCAACTTTGAATTTTGGGTATCAGATGAATGTCACGCTGTAAATGTGTCTGTGAAAAATGATATCTCGAGATCGGAGATTGTTTCTGATGATGTTGATCCAAGAGTGCAAACATTTTTCTTTTGTGGAAAGCCTCTAAAGCGTAGGACAACAGCAGACCAATCTTTGAAAAATGCAGTGGGCTTAGAGTCTTCCTTTCCTGCAGGAGGGACTGATATTTTGGAGAAGGATGATGGTATTTCTGCCACAATTATTCGATCACGTCCTGATCGAGACTCTGTTCAGTCAATGTCTGACTGTGATCAAGCAGTGCTTCAGTTTGCCAAGACAAGGAAGTTGTCAATTGAGCGTCCTGACCCACGAAACAGTACCTTCTTGAGGAAGCGACAATTTTTTCATTCACACAAAGCTCAGCCAATGGCAATTGAACAAGTTCTATCCGATAAAGATAGCGAAGATGAAGTTGATGATGATGTTGCCGATTTTGAAGATCGAAGGATGCTTGAAAATGTTGTTGATGTGAGCAATGATGAGAAGACTTTCATGCATATGTGGAACTCATTTGTTCGGAAGCATCGTGTGATTGCAGATGGTCACATTTCATGGGCATGTGAGGCTTTCTCAAAATTGCATGCACCTGAGTTTGTTCAATCTCCCTCACTGGCAGGGTGTTGGAGAATATTTATGGTCAAATTATACAATCATGGTCTTCTAGATGCTCGGACCATGAATGACTGTAATATTATTCTTGAGCAATACCAAAGGCAGAATTCAGATCCCAAAAGCTAA 1827 0.4111 MPGIPVSTRATSSHPDACEHLSAEEELAAEESLSIYCKPVELYNILQRRAMRNPSFLQRCLHYRIKAKHKKRIHMAVSLTRTITESQNVFPMSICLARRISDHGASRQTAMYRIGRIFIFRNSPGIDLNTQVQANFTLPEVNKLAEEARSCSLDILFVSTATVGNSHLSSGVNSNSMPSDLSHLAFFESGEYCLCGKVSLESLYMAWDCFPNFRLGQRAEIMSTVDLLPCILKSDFPNDDTRISIQVPSNFENMSTSKQVQITISAEEFGAKEKSPYLSYAGSEVPSSSLSHMIGLREGNVMFNYRYYNNKLQRTEVTEDFTCPFCLVKCACFKGLRCHLSSSHDLFNFEFWVSDECHAVNVSVKNDISRSEIVSDDVDPRVQTFFFCGKPLKRRTTADQSLKNAVGLESSFPAGGTDILEKDDGISATIIRSRPDRDSVQSMSDCDQAVLQFAKTRKLSIERPDPRNSTFLRKRQFFHSHKAQPMAIEQVLSDKDSEDEVDDDVADFEDRRMLENVVDVSNDEKTFMHMWNSFVRKHRVIADGHISWACEAFSKLHAPEFVQSPSLAGCWRIFMVKLYNHGLLDARTMNDCNIILEQYQRQNSDPKS* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0533 608 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 14 607 - -
Gso20g0533 608 Pfam VEFS-Box of polycomb protein 459 594 IPR019135 -
Gso20g0533 608 PANTHER POLYCOMB GROUP PROTEIN 14 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0533 Gso-Chr20 27011272 27024064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0533 1 600 C2H2 Transcription Factor Family AT5G51230 53.459 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0533 - - gmx:100815591 1201.04