Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0521 ATGGTTCTTGCCTCTCAGGTTCCTACCAAGCCATTGGAGGAAACATTCTATAGCATTGCATCTAAGCAGGTCCATGTGCCGAGCAGCTACCCACACCACTTGCTGTCACAGAATACGGAGTCCAATCACGTCATGTTATCCAGTGGCTCATCCCAGTCGATTCATAGCAAGAAATACATACATTGGACAAAAGAAGAACATAGGTCGTTTCTCCTTGGGCTTGAGGAATATAAAGAGAGTAGATGGGAAAAGATTTCAGAGAAATTTGTTCCATCAAAAACTCCAACTCAAGTCGTCAGTCATGCTAAAAAATTCTTCAAATGGAAGAATGCCCCAAAGAAAGAGAGGAAAAGAAGAAGCATCCATGAAACAACTTTAGACGACATTGATATGATCGTTACTCCTCATATTGATCAACATAATTGGCTTCCACCTCCTCCAAATTTTGCAGTGTAG 456 0.4145 MVLASQVPTKPLEETFYSIASKQVHVPSSYPHHLLSQNTESNHVMLSSGSSQSIHSKKYIHWTKEEHRSFLLGLEEYKESRWEKISEKFVPSKTPTQVVSHAKKFFKWKNAPKKERKRRSIHETTLDDIDMIVTPHIDQHNWLPPPPNFAV* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0521 151 Pfam Myb-like DNA-binding domain 62 104 IPR001005 -
Gso20g0521 151 ProSiteProfiles Myb-like domain profile. 62 106 IPR001005 -
Gso20g0521 151 CDD SANT 62 106 IPR001005 -
Gso20g0521 151 Gene3D - 59 110 - -
Gso20g0521 151 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 10 148 - -
Gso20g0521 151 SMART sant 58 108 IPR001005 -
Gso20g0521 151 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 57 107 IPR006447 GO:0003677
Gso20g0521 151 ProSiteProfiles SANT domain profile. 62 110 IPR017884 -
Gso20g0521 151 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 10 148 IPR043363 -
Gso20g0521 151 SUPERFAMILY Homeodomain-like 55 109 IPR009057 -
Gso20g0521 151 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 110 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0521 Gso-Chr20 26694872 26695327 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso20g0521 Myb_DNA-binding 1.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0521 - - gmx:102659784 308.531