Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0515 ATGACCAATCTTAGAAATCCTAGATTTAACCTCTTTTTGGTGTCTCTCTTGGTTACGTTGGTCCAAATCCAAACCAAGGTGCGGTGCTACCAGTACAAAGTTGGAGATCTAGATTCCTGGGGAATCCCCATTTCACCAAGTTCACAACTATACGACAAATGGTCCAAATACCACTACCTCAGCATTGGTGATTCCCTCCTGTTTCTATACCCACCAAGTCAAGATTCAGTGATTCAAGTAACAGAGGAATCCTACAAGAGCTGCAACCTTAAAGATCCGATTTTGTACATGAACAATGGTAACTCGTTGTTAAACATTACATCAGAGGGTGACTTCTACTTCACCAGTGGAGAGGCTGGTCATTGCCAAAAGAATCAAAAGCTTCATATAACCGTGGGGGTTGGGGGAAACACGAACGCACTTGCTCCAACTTCATTGCCTCTAAACGCACCCTCTTACCCAACTGTATTTGGCAACATTCCCATGGCTCCCTCTACTTCTTCCTCACCTCACCTAACTTCAAAATTTTCCCTCATAATTATTGGATTCTTCCTATGTTATGTGCACTGCTCCCTAGCATAA 582 0.4313 MTNLRNPRFNLFLVSLLVTLVQIQTKVRCYQYKVGDLDSWGIPISPSSQLYDKWSKYHYLSIGDSLLFLYPPSQDSVIQVTEESYKSCNLKDPILYMNNGNSLLNITSEGDFYFTSGEAGHCQKNQKLHITVGVGGNTNALAPTSLPLNAPSYPTVFGNIPMAPSTSSSPHLTSKFSLIIIGFFLCYVHCSLA* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0515 193 CDD OsENODL1_like 30 132 IPR041846 -
Gso20g0515 193 PANTHER MAVICYANIN 9 182 - -
Gso20g0515 193 Gene3D - 30 142 IPR008972 -
Gso20g0515 193 Pfam Plastocyanin-like domain 49 125 IPR003245 GO:0009055
Gso20g0515 193 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Gso20g0515 193 SUPERFAMILY Cupredoxins 29 132 IPR008972 -
Gso20g0515 193 PANTHER BLUE COPPER PROTEIN 9 182 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0515 Gso-Chr20 26377203 26378413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0515 11 162 Phytocyanin Superfamily AT1G64640 54.248 7.71e-53 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0515 - - gmx:100792701 399.053