Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0497 ATGGATCACTCCCTTTTGATTATTATCATCATATTTTCCATTACCTTTCTTAAAGCATTTAGATCACACTTGTTTAAGAAATCCAAGAAACAAGAATTGCCCTTGCCCCCTGGTCCCAAACCATGGCCTATAATCGGTAACCTTCCTGAAATGCTTACGCATAGGCCTACATTCCGATGGATACAAAACCTAATGAAGGAAATGAACACTGAAATTGCATGTATCCGCCTAGGAAATGTCCATGTTATCCCTGTGACTTGCCCGACCATTGCCCGTGAATTCTTGAGAAAACAAGATGCTACTTTCGCTTCTAGACCCAACAGTATAACCACTTCTCTTATTAGTCGTGGATATCTCACCACAACCCTTGTACCCTTTGGGGAGCAATGGAAGAAAATGAGGAGAATTGTTAGTAATGATTTGTTGTCCACCACCACTCACCAACGACTTGAAAATAAGAGGGTCGAAGAAGCCGATAACCTTGTATTTTACATCTACAACAAGTGCAAAAACAATGTCAACGATAATGTTTGCCTTGTGAATGTGAGGTATGTTGCACAACACTATAGTTGCAATGTGATCAAGAAATTGATCTTTAGTACAAGGTATTTTGGGGAGGGTAAGAAGGATGGAGGTCCTGGTCGTGAGGAAGAGGAACATGTCGATTCCATTTTCACAATGCTTAAGTACATTTATGACTTTAGTGTTTCTGACTATGTCCCTTTCTTGAGGGGACTTGACTTAGATGGTCATGAGGGCAAGGTGAAGAAGGCCTTAGAAATTGTCGAGAAATATCATGATCCCATCATTGAGCAGCGAATCAAAGAAAGGAATAATGGGTCCAAGATTGATGGAGAGGATTTCCTTGATATTCTCATCTCACTCAAAGATGCCAACAATAATCCAATGTTGACAACCCAGGAAATCAAGGCACAAATCACCGAATTGATGATGGCAGCAATGGATAATCCAACAAATGCATTTGAATGGGGTCTTGGAGAGATGATAAACCAACCCAAGTTGCTCCAACGCGCTGTAGAAGAATTGGACACGGTAGTGGGGAAAGAGAGACTGGTCCAAGAATCAGACATTCCAAAGCTCAACTACATAAAAGCATGTGCAAGAGAAGCTTTTCGCCTTCACCCTATTGTGCCTTTCAATGTTCCCCATGTGTCTCTCAAAGACACAATAGTTGGAAACTACCTAATCCCAAAGGGTAGCCACATTCTGTTAAGTAGACAAGAACTTGGTCGTAACCCTAAAGTTTGGAATGATGAACCGCTCAAGTTCAAGCCAGAACGTCACCTAATTAATAAGAGTGATGTGGTTTTGACCGATCAAGATTTGAATCTCATATCATTCAGCACAGGACGACGTGGTTGTCCAGGATTCATGCTTGGAACCACAATGACTGTGATGTTATTTGCTAGGTTACTCCATGCCTTCACTTGGATTGCACCACCCAATGTGTCACACATCAACCTTGCCGAGTCAAGCCATGATATATCTCTTGCTCACCCACCTCTCGCACTAGCAAAGCCAAGATTACCGCCAGAGCTTTACAATAAATGA 1572 0.4186 MDHSLLIIIIIFSITFLKAFRSHLFKKSKKQELPLPPGPKPWPIIGNLPEMLTHRPTFRWIQNLMKEMNTEIACIRLGNVHVIPVTCPTIAREFLRKQDATFASRPNSITTSLISRGYLTTTLVPFGEQWKKMRRIVSNDLLSTTTHQRLENKRVEEADNLVFYIYNKCKNNVNDNVCLVNVRYVAQHYSCNVIKKLIFSTRYFGEGKKDGGPGREEEEHVDSIFTMLKYIYDFSVSDYVPFLRGLDLDGHEGKVKKALEIVEKYHDPIIEQRIKERNNGSKIDGEDFLDILISLKDANNNPMLTTQEIKAQITELMMAAMDNPTNAFEWGLGEMINQPKLLQRAVEELDTVVGKERLVQESDIPKLNYIKACAREAFRLHPIVPFNVPHVSLKDTIVGNYLIPKGSHILLSRQELGRNPKVWNDEPLKFKPERHLINKSDVVLTDQDLNLISFSTGRRGCPGFMLGTTMTVMLFARLLHAFTWIAPPNVSHINLAESSHDISLAHPPLALAKPRLPPELYNK* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0497 523 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 521 - -
Gso20g0497 523 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 5 521 - -
Gso20g0497 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Gso20g0497 523 Pfam Cytochrome P450 36 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0497 523 SUPERFAMILY Cytochrome P450 36 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0497 523 Gene3D Cytochrome P450 21 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0497 523 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0497 523 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0497 523 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0497 523 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0497 523 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0497 523 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso20g0497 523 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0497 Gso-Chr20 24725418 24727771 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0497 4 521 Cytochrome P450 AT5G05260 52.885 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0497 - K14984 gmx:100779934 1019.22