Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0484 ATGAAAAGATTTCATAGTGATAGTAAATTCTTTACTTTTTCGATCTTGATTTTCCTTGTTGTACTCCCGACTCTAGTCGTTGCTGAGTGCACGTGCGATCGAGAAGATGAGGAGCGTGACAAATCAAAAGCTTTAAGGTACAAAATAGCGGCTTTGGTATCAATACTAGTTGCTGGCGCGATCGGCGTGTGCATTCCACTTCTTGGCAAAGTTATATCCGCTTTGAGCCCTGAGAAGGATACCTTCTTCATCATTAAGGCCTTTGCGGCAGGAGTGATATTATCAACCGGTTTTATTCATGTCCTACCGGACGCTTTCGAGAACCTCACGTCGCCTTGTTTAAAGGAGCATCCATGGGGTGAGTTTCCTTTCACTGGCTTTGTGGCTATGTGCACTGCCATGGGTACTCTTATGGTTGACACTTATGCCACGGCTTATTTTAAAAAACATCATCATTCACAAGATGAGGCCACAGATGTAGAAAAGGAATCAGGGCATGAAGGACATGTGCATCTTCACACACATGCAACACATGGTCATGCACATGGGCATGTTCCAACTGATGATGATCAATCATCGGAACTTCTTCGTCATAGGGTCATATCACAGGTGTTGGAGGTAGGAATTATTGTTCATTCTATCATCATTGGAATTTCTTTGGGAGCTTCAGAGAGTCCTAAAACAATAAGACCACTGATGGCTGCATTGATTTTTCATCAATTTTTTGAAGGCATGGGACTTGGAAGTTGTATAACTCAGGCAAATTTCAAGAAGTTATCTATTACATTAATGGGGTTATTCTTTGCTTTAACAACTCCAATGGGAATTGGAATTGGCATAGGGATCACTAAAGTTTACGATGAAAACAGTCCAACTGCCCTTATTGTGGAAGGAATCTTCAATGCAGCATCAGCTGGGATATTGATTTACATGGCACTTGTAGATCTTCTTGCTGCAGATTTTATGAATCCAAGAATGCAAAAAAGTGGCAGCCTCCGATTAGGAGCCAATCTCTCTCTTCTACTTGGAGCTGGTTGTATGTCTCTTCTGGCTAAATGGGCTTAA 1065 0.4178 MKRFHSDSKFFTFSILIFLVVLPTLVVAECTCDREDEERDKSKALRYKIAALVSILVAGAIGVCIPLLGKVISALSPEKDTFFIIKAFAAGVILSTGFIHVLPDAFENLTSPCLKEHPWGEFPFTGFVAMCTAMGTLMVDTYATAYFKKHHHSQDEATDVEKESGHEGHVHLHTHATHGHAHGHVPTDDDQSSELLRHRVISQVLEVGIIVHSIIIGISLGASESPKTIRPLMAALIFHQFFEGMGLGSCITQANFKKLSITLMGLFFALTTPMGIGIGIGITKVYDENSPTALIVEGIFNAASAGILIYMALVDLLAADFMNPRMQKSGSLRLGANLSLLLGAGCMSLLAKWA* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0484 354 PANTHER ZINC TRANSPORTER 1 19 354 - -
Gso20g0484 354 TIGRFAM zip: ZIP zinc/iron transport family 31 354 IPR004698 GO:0005385|GO:0016021|GO:0071577
Gso20g0484 354 Pfam ZIP Zinc transporter 47 351 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Gso20g0484 354 PANTHER ZINC/IRON TRANSPORTER 19 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0484 Gso-Chr20 22908378 22911979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0484 15 354 Inorganic Solute Cotransporters AT3G12750 56.160 1.47e-136 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0484 K14709 - gmx:547695 644.425