Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0441 ATGATGACATTGGTTGACGAGCTGGAGACATTGGTTGACGAGCTGGATGCATTGGACTTGGGGTCGTCGGTGGTGCCGGTGAAGAAGGTCCCATACGGCGACGTGTTCGAGGCGTCCCGCGCGGGCGACGTCGAGCGGCTCCGGTACCTTCTGGAGGCAGGCGTGAACGTGAACGCTCGTGACCAGTGGGACTCCGTTGCCCTCTACTACGCCTGCCTCGCCGGCCACCTCGACGCCGCCCGCACGCTCCTTGAGAACGGCGCCATCTGCTCCGAAAACACCTTCGACGGCGACCGCTGCCACTACGCCGCCCTCAATTTGAGTGTCCGCAGACTCCTCAAGGCCTTCGAGGCCCGCCCCCCTCCCTTGGACCCCTTGCAGGCCTCTTTGCGCGACACCTTCCTCGGCTGTATTCCATCCACTCAGGGGTCCATTTGCAGCAGCAGCCACTTCCCTCCAGATGTAGCTTTTATTGTACAAGGAAAACCTATTCGAGCTCACAGAGTCATATTAAGTTCGAGGTCACCATTTTTCAAGAAAAAATTTACAACTGATTGGAAGGAGCGCAGTGAAGTTAGATTCTCAAGGGAAAGGTTGTCATATCCTGCACTTTATAGCCTTATACACTTCTTTTATTCAGACAGATTAGAGGTTGCTGTTGATGACATGCAGGACCTTATAAGAATCTGCAAAGTATGCAGATGTGAATCACTGCATAAAGTTCTTGAGAAAGAACTGATTCATCAAAAGTATGCAGATTATAAGGCACTGGGTGATGTAGATAACTCTCAGAAACGGTATATCTTGCAAGGTCTATCCCTTCCCCAAGAAGATAGGCTTCCTGCAGCCTTGCATCGAATCCTTCTGACCACCCTTTCAAATTCAACCCGCCAAAGTGGTCAAGAAGATGAAATTGATAAGTTGGTAACTAGGATGGGTGCCATGCAGATGGCAAAATCTCTGGATGATCTCGCTGATGTTTGTGTAAGAGTTGATAGAAAAATTTTCCGCTGTCACCAAGTTATTCTGGCATCTAGGTCAGAATATTTCAAAGCAAGATTATCACATATGAAGGACTTCCATGAAGACATAGATGAGTTATCTGTTGACATCCTTCCTTGCCTTGAAGAACATGACTTGAGCATGGAAGCTTTTGAGAAAATGATTGAGTATATGTACACTGATCGTTTGCAGGATATAAATCCAGATCAGGCTGAGGAAATGTTGGATGTTGCTTCTAGATACTTATTGTTTCCTCTCAAGCGGGCGGTGGCTGATGTCTTGTTGCCACACTTGGAAATGGTGTCACCTGAAGAACTTTGCCATTGGTTAATACTAGCAGACATGTATGGTGTTTGCAAGATTCGGGAATATTGTCTAGACACAATTGCTTGTAATTTCGAAACATTTGCTGATACTAAAGAATTTCGGGCAATGTTGTTGACTTTGCCTCCACCATCTGGAGACTCGTCTCTTCGTACCACTGTCCCGAGGATTCCTGGATCTGCTCTTAATGCCGATCAAGGAAATCTTCTTGATGATTTACGTGAGAAATGGCTTGAAATTGAAGCTGCTGAGCTTGACAAGAGAGATGAGAGTGCTTTGCAATTTGACAAGCGTCTAGAGATGCTTATGCTTGTTGCAGAGCAAGAAAAATCATCAGACAATGCTGATTTAGATGGTATTAATGACACGCTTGCCATTCTTCCCAATCACCACTCTGATTTAAGGTGA 1734 0.466 MMTLVDELETLVDELDALDLGSSVVPVKKVPYGDVFEASRAGDVERLRYLLEAGVNVNARDQWDSVALYYACLAGHLDAARTLLENGAICSENTFDGDRCHYAALNLSVRRLLKAFEARPPPLDPLQASLRDTFLGCIPSTQGSICSSSHFPPDVAFIVQGKPIRAHRVILSSRSPFFKKKFTTDWKERSEVRFSRERLSYPALYSLIHFFYSDRLEVAVDDMQDLIRICKVCRCESLHKVLEKELIHQKYADYKALGDVDNSQKRYILQGLSLPQEDRLPAALHRILLTTLSNSTRQSGQEDEIDKLVTRMGAMQMAKSLDDLADVCVRVDRKIFRCHQVILASRSEYFKARLSHMKDFHEDIDELSVDILPCLEEHDLSMEAFEKMIEYMYTDRLQDINPDQAEEMLDVASRYLLFPLKRAVADVLLPHLEMVSPEELCHWLILADMYGVCKIREYCLDTIACNFETFADTKEFRAMLLTLPPPSGDSSLRTTVPRIPGSALNADQGNLLDDLREKWLEIEAAELDKRDESALQFDKRLEMLMLVAEQEKSSDNADLDGINDTLAILPNHHSDLR* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0441 577 ProSiteProfiles BTB domain profile. 325 401 IPR000210 GO:0005515
Gso20g0441 577 Gene3D Potassium Channel Kv1.1; Chain A 141 265 IPR011333 -
Gso20g0441 577 Gene3D Potassium Channel Kv1.1; Chain A 292 464 IPR011333 -
Gso20g0441 577 SUPERFAMILY POZ domain 148 248 IPR011333 -
Gso20g0441 577 Pfam BTB/POZ domain 151 249 IPR000210 GO:0005515
Gso20g0441 577 Pfam BTB/POZ domain 322 428 IPR000210 GO:0005515
Gso20g0441 577 ProSiteProfiles BTB domain profile. 153 220 IPR000210 GO:0005515
Gso20g0441 577 Pfam Ankyrin repeats (many copies) 37 84 IPR002110 GO:0005515
Gso20g0441 577 ProSiteProfiles Ankyrin repeat profile. 38 62 IPR002110 GO:0005515
Gso20g0441 577 SMART BTB_4 153 250 IPR000210 GO:0005515
Gso20g0441 577 SMART BTB_4 325 432 IPR000210 GO:0005515
Gso20g0441 577 SUPERFAMILY POZ domain 318 431 IPR011333 -
Gso20g0441 577 Gene3D - 35 140 IPR036770 -
Gso20g0441 577 CDD BTB_POZ_ZBTB_KLHL-like 324 415 - -
Gso20g0441 577 SUPERFAMILY Ankyrin repeat 37 108 IPR036770 -
Gso20g0441 577 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 15 548 IPR044515 -
Gso20g0441 577 CDD BACK 436 479 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Gso20g0441 BTB 2.2e-16 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0441 K10520 - gmx:100812009 1138.25