Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0426 ATGGAATTTTCGCAGAGTCACAGGGTAGAGATGATAAGCATGGCAGTTGCTCTTGTTGCCATTGTTGGTGGCACCGCTTACTATTACTACGTCACCAAGAAGCCAAAAGGGTGCTTGGATCCTGAGAACTTCAAAGAATTTAAACTTGTTAAACGCACTCAACTCAGCCATAATGTTGCCACGTTCCGATTTGATCTTCCTACTCCTAAGTCAGTGTTGGGACTTCCTATTGGACAACATATCAGCTGCAGAGGGAAGGATAGTCTTGGTGAAGAAGTTGTGAAACCATATACTCCTACAACATTGGATACTGATGTTGGATACTTTGAATTGGTTGTGAAGATGTATCCACAAGGACGGATGTCTCATCACTTTAGGGAGATGCGTGAAGGTGATTACATGGCTGTGAAGGGACCAAAGGGACGTTTTAAGTACCAGCCCAACCAAGTAAGAGCTTTGGGTATGATTGCTGGTGGCACTGGCATCACCCCAATGTTTCAAGAAGAGCTGGATGCCTTTGCCATTAAGTTCCCTAATCAATTCAAAGTTTACTATGTTCTAAATCAGCCACCAGAAATATGGGACGGTGGTGTTGGATTCGTCACTAAGGAAATGATCCAAACAGATTTCCCTGCACCAGCATCAGATATTAAGATATTAAGGTGTGGACCACCTCCCATGAACAAGGCTATGGCTGCTAATCTTGAAGCTCTTGGATACAGTCCCCAAATGCAGTTTCAGTTTTAA 747 0.4351 MEFSQSHRVEMISMAVALVAIVGGTAYYYYVTKKPKGCLDPENFKEFKLVKRTQLSHNVATFRFDLPTPKSVLGLPIGQHISCRGKDSLGEEVVKPYTPTTLDTDVGYFELVVKMYPQGRMSHHFREMREGDYMAVKGPKGRFKYQPNQVRALGMIAGGTGITPMFQEELDAFAIKFPNQFKVYYVLNQPPEIWDGGVGFVTKEMIQTDFPAPASDIKILRCGPPPMNKAMAANLEALGYSPQMQFQF* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0426 248 Pfam Oxidoreductase FAD-binding domain 47 145 IPR008333 -
Gso20g0426 248 SUPERFAMILY Riboflavin synthase domain-like 35 148 IPR017938 -
Gso20g0426 248 Pfam Oxidoreductase NAD-binding domain 166 231 IPR001433 GO:0016491
Gso20g0426 248 CDD cyt_b5_reduct_like 47 248 - -
Gso20g0426 248 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 42 146 IPR017927 GO:0016491
Gso20g0426 248 Gene3D Translation factors 35 139 - -
Gso20g0426 248 Gene3D - 165 248 IPR039261 -
Gso20g0426 248 PANTHER NADH-CYTOCHROME B5 REDUCTASE 168 248 - -
Gso20g0426 248 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 167 - -
Gso20g0426 248 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 135 243 IPR039261 -
Gso20g0426 248 PANTHER NADH-CYTOCHROME B5 REDUCTASE 1 167 IPR001834 GO:0016491
Gso20g0426 248 PANTHER NADH-CYTOCHROME B5 REDUCTASE 168 248 IPR001834 GO:0016491
Gso20g0426 248 PRINTS Cytochrome B5 reductase signature 73 84 - -
Gso20g0426 248 PRINTS Cytochrome B5 reductase signature 95 102 - -
Gso20g0426 248 PRINTS Cytochrome B5 reductase signature 131 145 - -
Gso20g0426 248 PRINTS Cytochrome B5 reductase signature 154 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0426 Gso-Chr20 14217327 14230103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0426 27 248 NADPH P450 reductases AT5G17770 70.238 9.21e-131 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0426 K00326 - gmx:100812559 495.352