Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0421 ATGAAGAAGAAGCTTTCTCTTTATGCTTTTTTGCTCAATTTGAGTCTCTTGGTTCTTCTTCCTTACAGCAAAGCCACTCAGGCTGATAAGCTTCAAGATTTGATTCTGTCTAAGAGCTCGCAGAAGCCACCTGTGACCCTTTCTTGGGCAGAGGAAGATGCGTTGAAAACTCATTCTTCTGCATATGTTGCATCCCAAGAGGGGCAAAAGGAAGCTGACAAGATTGTCGCATTGCCTGGCCAACCCTATGGGGTGAATTTTGACCAATATTCAGGCTATGTCACTGTTGATCCAGAGGCCGGAAGAGCACTTTTCTATTATTTTGTGGAGTCTTCATATAACCCTTCGACTAAACCTTTAGTATTGTGGCTAAATGGAGGACCTGGTTGTTCCTCACTGGGGTATGGTGCCTTTGAGGAATTGGGACCTTTCAGAATAAACTCTGATGGCAAAACACTATATCGCAACAAATATGCTTGGAATGTAGTGGCAAATGTGTTGTTCTTAGAATCCCCTGCTGGAGTGGGCTTTTCCTACTCAAATACTATTTCTGACTATGAGCATTCAGGAGATAAGTCAACTGCAAAAGATGCCTATGTTTTCCTGATCAATTGGCTAGAGAGGTTTCCAGAGTACAAAACCCGCGATTTTTACATAACTGGAGAGAGCTATGCTGGCCATTATGTGCCTCAGCTTGCATACACTATTTTGGTGAACAATAAATTCAGTCAACAAAATATTAACCTCAAAGGCATTGCTATAGGGAATGCTTGGATTGATGATGTTACAAGTTTGAAGGGGATATATGATTACATATGGACTCATGCTTTGAGCTCAGATCAAACTCATGAGTTGATTGAGAAGTACTGCGATTTCACTTCTGAAAACGTTTCTGCGATATGTGCCAATGCAACAAGAACAGCCTTTGAGGAGAATGGAAACATAGACCCTTATAACATCTATGCTCCACTGTGTCAGGACTCTTCTCTTAAAAATGGATCAACTGGTTCTGTATATGATTTTGACCCGTGTTCTGATTACTACGGGGAAGCCTATCTAAATAGGCCAGAGGTCCAATTAGCTCTTCATGCAAAACCCACAAACTGGACCCACTGCAGTGATATAATAAACTGGAACGACAGTCCAGCTAGCATCCTACCCGTCATCAAGTATCTCATCGACAGTGACATTGGATTGTGGATATACAGTGGTGATACTGATTCAGTTGTTCCAGTCACATCTTCAAGATATTCAATCAACACCCTCAAGCTCCCTATCCAGGTTCCTTGGCGTCCATGGTATTCTGGAAATGAGGTTGGAGGATATGTGGTTAAATACAACGGTGTGACATTTGTTACAGTAAGAGGAGCGGGACATCTGGTTCCAAGCTGGCAACCATCGCGGACTCTGACTTTGATATTTTCATTCCTCCATGGAAGCTTGCCTCCTACTTCACCATGGAAGGGTTTCTAG 1473 0.4257 MKKKLSLYAFLLNLSLLVLLPYSKATQADKLQDLILSKSSQKPPVTLSWAEEDALKTHSSAYVASQEGQKEADKIVALPGQPYGVNFDQYSGYVTVDPEAGRALFYYFVESSYNPSTKPLVLWLNGGPGCSSLGYGAFEELGPFRINSDGKTLYRNKYAWNVVANVLFLESPAGVGFSYSNTISDYEHSGDKSTAKDAYVFLINWLERFPEYKTRDFYITGESYAGHYVPQLAYTILVNNKFSQQNINLKGIAIGNAWIDDVTSLKGIYDYIWTHALSSDQTHELIEKYCDFTSENVSAICANATRTAFEENGNIDPYNIYAPLCQDSSLKNGSTGSVYDFDPCSDYYGEAYLNRPEVQLALHAKPTNWTHCSDIINWNDSPASILPVIKYLIDSDIGLWIYSGDTDSVVPVTSSRYSINTLKLPIQVPWRPWYSGNEVGGYVVKYNGVTFVTVRGAGHLVPSWQPSRTLTLIFSFLHGSLPPTSPWKGF* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0421 490 ProSitePatterns Serine carboxypeptidases, serine active site. 219 226 IPR018202 GO:0004185
Gso20g0421 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 156 168 IPR001563 GO:0004185|GO:0006508
Gso20g0421 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 179 IPR001563 GO:0004185|GO:0006508
Gso20g0421 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 205 230 IPR001563 GO:0004185|GO:0006508
Gso20g0421 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 449 462 IPR001563 GO:0004185|GO:0006508
Gso20g0421 490 Gene3D - 385 479 - -
Gso20g0421 490 Pfam Serine carboxypeptidase 79 479 IPR001563 GO:0004185|GO:0006508
Gso20g0421 490 SUPERFAMILY alpha/beta-Hydrolases 76 480 IPR029058 -
Gso20g0421 490 PANTHER CARBOXYPEPTIDASE 19 484 - -
Gso20g0421 490 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 19 484 IPR001563 GO:0004185|GO:0006508
Gso20g0421 490 Gene3D - 344 377 - -
Gso20g0421 490 Gene3D alpha/beta hydrolase 69 327 IPR029058 -
Gso20g0421 490 ProSitePatterns Serine carboxypeptidases, histidine active site. 449 466 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0421 Gso-Chr20 13689096 13694273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0421 341 480 Calmodulin-binding Proteins AT2G22960 29.530 1.10e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0421 K16297 - gmx:100790394 987.252