Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0396 ATGGAAGTTAAGAGAAAAATAATCCTATGCTTATTGATTGCCATCACAATGGGGTGCTACAGAATTGAAGGGAGAGACCCTACACTCCACAGGGTTGGAGGAGGAAGGTATACTTGGTCCCCAAAAGTTAACTTCACAAAGTGGGCAAGTCATGAACACTTCTACAAGGGTGACTGGCTATATTTTGGTTTTGACAAGCGCATCTATAATGTTTTGGAGGTGAATAAAACAAACTACGAGAATTGTATTGACACGGGCTTCATAGAAAATATCACAAGAGGAGGGAGAGATGTTTTCCAGCTTTTAGAGGCAAGGCACTATTATTTCATATGTGGCAGAGGCTTTTGCTCACAAGGAATGAAACTCCTAATAGATGTTAAGGAACCCACAACAACACTGCCACCTCCAATATTGCCCAACAAGGCCCTTCTAAATAGATTGAGTAATACGCTCATGCTTGTGGTCACCATTTTGGCATGGATCTTCATATAG 492 0.4126 MEVKRKIILCLLIAITMGCYRIEGRDPTLHRVGGGRYTWSPKVNFTKWASHEHFYKGDWLYFGFDKRIYNVLEVNKTNYENCIDTGFIENITRGGRDVFQLLEARHYYFICGRGFCSQGMKLLIDVKEPTTTLPPPILPNKALLNRLSNTLMLVVTILAWIFI* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0396 163 PANTHER BLUE COPPER PROTEIN 5 159 IPR039391 GO:0009055
Gso20g0396 163 PANTHER EARLY NODULIN-LIKE PROTEIN 5 159 - -
Gso20g0396 163 Pfam Plastocyanin-like domain 39 120 IPR003245 GO:0009055
Gso20g0396 163 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Gso20g0396 163 Gene3D - 27 128 IPR008972 -
Gso20g0396 163 SUPERFAMILY Cupredoxins 28 126 IPR008972 -
Gso20g0396 163 ProSiteProfiles Phytocyanin domain profile. 28 128 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0396 Gso-Chr20 11921728 11922354 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0396 26 154 Phytocyanin Superfamily AT2G27035 58.140 2.91e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0396 - - gmx:100789719 336.265