Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0395 ATGATACATCAAGATTTGAAGCCATCAAATATATTGGTTATGAGTGAAGGAGAGGAGCATGGAGTTGTTAAGATGGCTGACTTTGGACTTGCGAGGATATATCAAGCTCCTTTGAAGCCGTTATGTGACAATGGGGTTGTTGTAACCATTTGGTATCATGCACCTGAGTTGCTTCTTGGACCAAAACATTATACCAGTGTTGTTGATATGTGGATTGTGGGATGCATTTTTGCTAAGTTGTTGACCTTGAAGCCACTATTTCAAGGGGCAGTAGTTAAAGCTACACCAAATCCCTTTCAGCTTGATCAACTTGACAAGATATTTAAGGTTTTAGGACATTGTTACTATGCAAGGCCATCCCACATTAGAAAAGTGGCCTTCCTTAGTAAGTCTTCCACATTGGCAACAAGATGTGCAACATATACAAGGACACAAATATGA 441 0.3968 MIHQDLKPSNILVMSEGEEHGVVKMADFGLARIYQAPLKPLCDNGVVVTIWYHAPELLLGPKHYTSVVDMWIVGCIFAKLLTLKPLFQGAVVKATPNPFQLDQLDKIFKVLGHCYYARPSHIRKVAFLSKSSTLATRCATYTRTQI* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0395 146 Gene3D Transferase(Phosphotransferase) domain 1 1 145 - -
Gso20g0395 146 PANTHER CELL DIVISION PROTEIN KINASE 2 112 - -
Gso20g0395 146 PANTHER CYCLIN-DEPENDENT KINASE 11A-RELATED 2 112 - -
Gso20g0395 146 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1 13 IPR008271 GO:0004672|GO:0006468
Gso20g0395 146 ProSiteProfiles Protein kinase domain profile. 1 146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g0395 146 Pfam Protein kinase domain 2 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g0395 146 SUPERFAMILY Protein kinase-like (PK-like) 2 125 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0395 Gso-Chr20 11904024 11908763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0395 1 113 Core Cell Cycle Gene Families AT5G63610 83.186 8.62e-66 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Gso20g0395 Pkinase 3.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0395 K02208 - gsj:114402864 301.982