Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0371 ATGAAAGATGACAAACAGGCTCCAGTTCCTGCTTCTACAACCGAAGGACAACCTATACGATGTAAAGCGGCGGTTTCTAGAAGAGCTGGTGAGCCGTTGGTTATTGAGGACATCATTGTGGCGCCGCCAAAGCCTCGTGAGGCTCGGATTCGTATTATTTGTTCCTCTCTCTGCCACAGCGACATCACACTTCGGAACCTTCAGGACCCTCCTGCCATTTTCCCAAGGATTCTAGGTCATGAGGCAACTGGGGTTGTGGAAAGTGTTGGGAAGGATGTAACTGAAGTTACAAAAGGTGATGTGGTAATTCCAGTTATCCTACCAGAATGTGGGGAGTGCATAGATTGCAAATCAACCAAGAGCAACCGGTGCACTAATTTTCCTTTCAAGGTGTCTCCTTGGATGCCTCGAGATGGCACCACAAGATTCACTGGCCAAAATGGAGAGATCATATACCATTTCTTGTTTATTTCAAGTTTCAGTGAGTACACTGTGGTGGACATTGCTAATCTGATAAAGATTGATCCAGAAATTCCTCCTGACAGAGCATGCCTTCTCGGATGTGGTGTTTCAACAGGGGTAGGTGCTGCTTGGAGAACTGCAGGTGTGGAACCCGGGTCAACAGTAGCTATTTTTGGGTTGGGATCTATTGGATTAGCTGTTGCAGAGGGAGCTAGACTTTGTGGAGCAACTAGGATTATAGGTGTGGACATCAACCCAGAAAAGTTTGAAATTGGAAAGAAGTTTGGAGTCACAGACTTTGTCAATGCTGGAGAATGTGGGGGCAAACCTGTTGGCCAGGTTATCATAGAGATAACTGATGGGGGAGCGGATTATTGCTTTGAATGTGTTGGTATGGCATCATTGGTGCATGAAGCATATGCTTCTTGTAGAAAGGGTTGGGGAAAAACAATTGTTTTAGGAGTGGACAAGCCCGGAGCTAGGATAAACCTCAGTTCTTACGAGGTCCTTCATGATGGAAAGAGCCTCATGGGATCCTTATTTGGAGGTCTCAAACCCAAGTCTCATGTACCCATTCTCCTTAAACGTTACATGGACAAGACCTCCAACTTCAAGATGATTGGAGTAGCTAAGCAACATCAAGGTCTTTTCCATTTGTAG 1122 0.4563 MKDDKQAPVPASTTEGQPIRCKAAVSRRAGEPLVIEDIIVAPPKPREARIRIICSSLCHSDITLRNLQDPPAIFPRILGHEATGVVESVGKDVTEVTKGDVVIPVILPECGECIDCKSTKSNRCTNFPFKVSPWMPRDGTTRFTGQNGEIIYHFLFISSFSEYTVVDIANLIKIDPEIPPDRACLLGCGVSTGVGAAWRTAGVEPGSTVAIFGLGSIGLAVAEGARLCGATRIIGVDINPEKFEIGKKFGVTDFVNAGECGGKPVGQVIIEITDGGADYCFECVGMASLVHEAYASCRKGWGKTIVLGVDKPGARINLSSYEVLHDGKSLMGSLFGGLKPKSHVPILLKRYMDKTSNFKMIGVAKQHQGLFHL* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0371 373 PANTHER ALCOHOL DEHYDROGENASE 14 358 - -
Gso20g0371 373 Pfam Alcohol dehydrogenase GroES-like domain 46 174 IPR013154 -
Gso20g0371 373 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 14 358 - -
Gso20g0371 373 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 178 353 IPR036291 -
Gso20g0371 373 Pfam Zinc-binding dehydrogenase 217 337 IPR013149 -
Gso20g0371 373 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 79 93 IPR002328 GO:0008270|GO:0016491
Gso20g0371 373 Gene3D - 193 333 - -
Gso20g0371 373 SUPERFAMILY GroES-like 14 199 IPR011032 -
Gso20g0371 373 Gene3D - 24 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0371 Gso-Chr20 10198215 10209382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0371 46 214 Monolignol Biosynthesis Gene Families AT4G37970 26.471 1.35e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0371 K00121 - gmx:100817521 724.546