Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0364 ATGGGGATTCAGACAGTGGGATCTCTAGGTAACGGGCAACAGTCTCATTTACAGCCTTCATCATTGTCTAGGCAAGGTTCATGGTATAGTCTCACTCTTGATGAGGTCAATTGTCAATTAGGAGACATGGGAAAGCCATTGGGGAGCATGAACCTTGATGAGCTTCTTCAAAATGTGTGGACTGCTGAAGCAAGCAAGTCTTCGGTGGTGGTAGGCGTGGAGAGTGAGAACATGTCGTCATCGTCTTCCTCGCTGCAACGGCAGGCCAGCTTGACGCTGGCTCGTGCATTGAGTGGGAAGACGGTGGATGATGTGTGGAGGGAAATTCAGCAAGGTCAGAAGAAAAAGTATGGAGAGGATGTGAGGAGTCAGGAGGGAGAAATGACTCTTGGTGAGACCACCTTGGAGGATTTCTTGGTGCAAGCAGGGCTTTTTGCTGAAGCTTCTATCAGTCCAGCTGTGGGGTTGGATGCAATGGATTCCCTTGCCACGCAAGGTTTCCAACAGAAAACAGGCCTGTTATCATCCTCCCCCTCAATCGGGAGTTTATCAGACACGAGACTGGGCCGGAAAAGGGATGCTTCTGATGCGTACGAGAAAACTTTGGAAAGGAGGTTGAGGAGGAAAATCAAGAATAGGGAATCTGCTGCTCGGTCCCGAGCCCGAAAACAGGCTTACCATAATGAACTGGTTGGCAAGGTTTCCCGTCTAGAAGAAGAAAATGTAAAGCTCAAGAAAGAGAAGGAATTTGAAGAACGATTACTGCCTGATCCATTGCCTGAACGGAAATATCAACTTCGAAGACATAATTCTGCCTTTTTCTGA 825 0.48 MGIQTVGSLGNGQQSHLQPSSLSRQGSWYSLTLDEVNCQLGDMGKPLGSMNLDELLQNVWTAEASKSSVVVGVESENMSSSSSSLQRQASLTLARALSGKTVDDVWREIQQGQKKKYGEDVRSQEGEMTLGETTLEDFLVQAGLFAEASISPAVGLDAMDSLATQGFQQKTGLLSSSPSIGSLSDTRLGRKRDASDAYEKTLERRLRRKIKNRESAARSRARKQAYHNELVGKVSRLEEENVKLKKEKEFEERLLPDPLPERKYQLRRHNSAFF* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0364 274 PANTHER BZIP TRANSCRIPTION FACTOR 35 271 - -
Gso20g0364 274 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 35 271 IPR043452 GO:0003700|GO:0045893
Gso20g0364 274 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 202 247 IPR004827 GO:0003700|GO:0006355
Gso20g0364 274 Pfam bZIP transcription factor 204 248 IPR004827 GO:0003700|GO:0006355
Gso20g0364 274 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 207 222 IPR004827 GO:0003700|GO:0006355
Gso20g0364 274 SUPERFAMILY Leucine zipper domain 204 252 IPR046347 GO:0003700|GO:0006355
Gso20g0364 274 Coils Coil 227 254 - -
Gso20g0364 274 MobiDBLite consensus disorder prediction 173 196 - -
Gso20g0364 274 MobiDBLite consensus disorder prediction 1 21 - -
Gso20g0364 274 CDD bZIP_plant_BZIP46 204 241 - -
Gso20g0364 274 Gene3D - 202 254 - -
Gso20g0364 274 SMART brlzneu 200 272 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0364 Gso-Chr20 9655150 9666274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0364 21 274 bZIP Transcription Factor Family AT3G56850 46.367 1.36e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso20g0364 bZIP_1 1.8e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0364 K14432 - gmx:100807027 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g0364 20 9655150 9666274 Gso13g0523 13 17698528 17705560 GST