Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0361 ATGGAAAGCTATGAGAAAGCGTTTGCAAAACATGAAGGAGAAGCCAAGTGCAACAAATGGAAAGCTACTCTTACCGAAGTAGCCAATTTAGCTGGGTGGGACTCTAGAAATAGGACTGAATCTGAACTTCTTAAGGACATTGTTGGAGATGTATTAAGAAAATTGACTCCTAGATATCCAAACCAACTTAAAGGACTGGTTGGAATTGAGGACAATTATGAAAAAGTAGAATCATTACTAAAGATTGGGTCAAGTGAAGTTATAACCCTTGGAATATGGGGCATGGGTGGCATAGGAAAGACTACTCTTGCTAGTGCTTTCTATGCCAAACTGTCTCATGAGTTTGAGGCTGATTGCTTCCTTGTAAATGTAAGGGAAAATGCAAAAAGGCATGGATTAGAAGCTCTAAGTCAGAAACTTTTTTCTGAGTTGTTAGAGAATGAAAATCATTGTTTTGATGCACCCTTTTTAGTGTCCCAATTTGTCATGCGTAGGCTTGGATGTAAAAAAGTTCTCATTGTTTTGGATGATGTTGCTACCTCAGAGCAGTTAGAATATCTAATTAAAGATTATGATTTGTTAGGACAAGGAAGTAGAGTCATTGTTACAACTAGAAATAAGCAAATATTTAGACAAGTTGATGAAGTATATGAGGTCAAGGAATTGAGTTTTCATAACTCTCTTCAGCTTTTCTGTTTGACTGTTTTTGAAGAAAAACAACCTACACATGGATATGAAGATCTATCAAGTCGTGCAATTTCATATTGCAAAGGGATTCCTTTGGCTTTAAAAGTTTTGGGTGCAGGTTTTCGTCGGAGAAGTAAAGAAACATGGGAAAGTGAATTGAGAAAACTCCAAAAGATCCCAAATACGGAAGTTCATGATGTATTAAAATTAAGTTATGATGCCTTAGATGATTCTCAACAGGACATCTTTTTGGACATTGCATGCTTCTTCAATGGAGAAGACAAAGAATGGGTAACAAGTCTTATGGAAGCTTGTGAATTCTTTGCAGTATCAGATATAGAAGTCCTTTTGGATAAAGCTTTCATAACAATATCCAATTTCAATAAGATAGAAATGCATGGCTTGATACAACAAATGGGTAGAGAAATTGTTCGTCATCAATCCATCAAAAGCCCTGGAAAACGAAGTCGGTTATGGAAACCTGAGGAAGTTCAAGAAGTATTGAAATATAAAAGAGGAACCGATGTTGTTGAAGGCATAAGTTTAGATTTGTGTAAATTAACCGGGGATCTAAATTTGAGCTCTAATTCCTTCGCAGAGATGATTAACTTGAGATTTCTTATAATTCATGATTCGTGCCGGACAAATCGATTTCATGTGTACTTTCCAAATGGTCTCGAATCATTATCTTCTAAATTGAGGTACCTTCGTTGGGATGAATTCCATGTTGAGTCTTTGCCATCTAGCTTTTGTGCTGAACAACTTGTAGAGCTTCGCATGCTTCGTAGCAAGGTTAAAAAGCTTTGGGATGGGGTTCAGAATCTTTTGAATTTGAAGACAATTGACCTTGATGACTCCCGAGACTTGATTGAGATCCCGGACTTATCAATGGCAGAAAATCTTGAAAAAGTGTCTCTTTTTGGTTGTGAAAGCTTGCATCAGCTCCATCCATCCATCTTATCTCTCCCCAAGCTTAGATATTTGATTTTAAGTGGCTGCAAAGAAATTGAAAGCCTTAATGTTCATTCAAAATCTCTCAATGTACTGAGACTCAGAGGTTGTTCATCTCTCAAGGAATTTTCAGTGACATCAGAGGAAATGACACATTTGGACTTATCTCAGACTGCTATACGTGCATTATTGTCGTCAATGTTATTTCTCCTGAAGCTTACATATTTGTATTTAAGTGGCTGTAGAGAGATTGAAAGCCTTAGTGTTCATATAAAATCTCTCCGTGTACTGACACTCATCGGTTGTTCATCTCTCAAGGAATTATCGGTGACATCAGAGAAATTGACAGTATTGGAGTTACCTGACACTGCTATATTTGCATTGCCAACATCAATTGGTCACTTATTATCTTTAAAAGAGTTAGACCTATGTGGAACTAATATTGAGCTTTTGCCTGCAAGCATCAAAATCCTTTCAATGCTGAAAGTGCTTTGGTTAAATGATTGTAGGAAATTGGTGTCTCTGCAGGAGCTTCCACCATCCCTGAGCGAGCTTTATTTAAATGATTGTTGTAAACTCGTGTCTCTGCCGGAGCTTCCACCATCGGTTAAAGAGGTGAGTGCCTTTAACTGTATTTCTCTGGAGACAGACATCACACAAGATCTAGTGTTACAACACATGTTACAAAGCCGCATACCCTACATACATCAACAATATCTTTACAATCCTGCGTATTTTGATGATGGGTATTTCATCTTCCCGCTAGGAGACCATGTCACCGACTTGTGTAGGTTTCGTACAGCAGAGAGTTCGATAACTATTCCGTCTCTTCCTAAGTCTCAATTGCGGGGTTATGTTTCTGTCATCATTCTTTCTAAGGGTCCAGTGTCAGATCATCAGTTTTCTTGTTCTATCCATCGAGATGACATATTGATAGGTTGTGACCGTCGCAGGTTTATAGGCTGCGAAAATTTAATTTCAGATCATGTGTTATTTTGGTATCATAATGCCAGCAAATTTTGTGGAACAGGTGAAGTGTATGATCCTTTCAGTAACATGACATTTATATTTGCTGACATTAATGGTAATAAAGACACCATAAAAGGATGTGGGGTCTTTCCAGTATATGGGACAGAATCCGGGTTTAAGCTGGTGAGTAGTAGCAGCAACGAAATTTTTGACAATGAGTCAGAACCAAGAGCAAAAGAAGTTGGAGTTGAAAGCTGCAATAATGAAAATGAAGAAAACTGTGAACAACTTTTCAGAACCAAGAGGAGGAGAACTGCATGTGATAATCTTCCTGCCATTACTTCATCGAAAATCATGCATAACATTGTGCTGTAA 2982 0.3773 MESYEKAFAKHEGEAKCNKWKATLTEVANLAGWDSRNRTESELLKDIVGDVLRKLTPRYPNQLKGLVGIEDNYEKVESLLKIGSSEVITLGIWGMGGIGKTTLASAFYAKLSHEFEADCFLVNVRENAKRHGLEALSQKLFSELLENENHCFDAPFLVSQFVMRRLGCKKVLIVLDDVATSEQLEYLIKDYDLLGQGSRVIVTTRNKQIFRQVDEVYEVKELSFHNSLQLFCLTVFEEKQPTHGYEDLSSRAISYCKGIPLALKVLGAGFRRRSKETWESELRKLQKIPNTEVHDVLKLSYDALDDSQQDIFLDIACFFNGEDKEWVTSLMEACEFFAVSDIEVLLDKAFITISNFNKIEMHGLIQQMGREIVRHQSIKSPGKRSRLWKPEEVQEVLKYKRGTDVVEGISLDLCKLTGDLNLSSNSFAEMINLRFLIIHDSCRTNRFHVYFPNGLESLSSKLRYLRWDEFHVESLPSSFCAEQLVELRMLRSKVKKLWDGVQNLLNLKTIDLDDSRDLIEIPDLSMAENLEKVSLFGCESLHQLHPSILSLPKLRYLILSGCKEIESLNVHSKSLNVLRLRGCSSLKEFSVTSEEMTHLDLSQTAIRALLSSMLFLLKLTYLYLSGCREIESLSVHIKSLRVLTLIGCSSLKELSVTSEKLTVLELPDTAIFALPTSIGHLLSLKELDLCGTNIELLPASIKILSMLKVLWLNDCRKLVSLQELPPSLSELYLNDCCKLVSLPELPPSVKEVSAFNCISLETDITQDLVLQHMLQSRIPYIHQQYLYNPAYFDDGYFIFPLGDHVTDLCRFRTAESSITIPSLPKSQLRGYVSVIILSKGPVSDHQFSCSIHRDDILIGCDRRRFIGCENLISDHVLFWYHNASKFCGTGEVYDPFSNMTFIFADINGNKDTIKGCGVFPVYGTESGFKLVSSSSNEIFDNESEPRAKEVGVESCNNENEENCEQLFRTKRRRTACDNLPAITSSKIMHNIVL* 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0361 993 Pfam Leucine Rich Repeat 483 502 IPR011713 -
Gso20g0361 993 Gene3D - 56 220 IPR027417 -
Gso20g0361 993 PRINTS Disease resistance protein signature 89 104 - -
Gso20g0361 993 PRINTS Disease resistance protein signature 165 179 - -
Gso20g0361 993 PRINTS Disease resistance protein signature 256 270 - -
Gso20g0361 993 PRINTS Disease resistance protein signature 502 518 - -
Gso20g0361 993 Gene3D - 222 305 IPR042197 -
Gso20g0361 993 Gene3D Ribonuclease Inhibitor 595 775 IPR032675 -
Gso20g0361 993 Gene3D Ribonuclease Inhibitor 403 594 IPR032675 -
Gso20g0361 993 Gene3D - 1 55 IPR035897 -
Gso20g0361 993 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 2 624 - -
Gso20g0361 993 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 694 966 - -
Gso20g0361 993 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 611 690 - -
Gso20g0361 993 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 315 IPR027417 -
Gso20g0361 993 SUPERFAMILY L domain-like 421 761 - -
Gso20g0361 993 SUPERFAMILY "Winged helix" DNA-binding domain 292 398 IPR036390 -
Gso20g0361 993 Pfam NB-ARC domain 72 301 IPR002182 GO:0043531
Gso20g0361 993 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 694 966 IPR044974 GO:0006952
Gso20g0361 993 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 611 690 IPR044974 GO:0006952
Gso20g0361 993 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 624 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0361 Gso-Chr20 9502600 9507376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0361 2 687 WRKY Transcription Factor Family AT4G12020 36.648 3.55e-108 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0361 - - gmx:100813283 1929.84