Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0353 ATGGCCACAACAGCAAAGAATGTGGTGGTGATCCAGGATGCATCTAAAACACTTAATTTAAGAGTTTTTTATTGGATTATAAATGGCTTATCTCTTAAGCCAGAAGATGTGGTGACCCTAGTTGCAATCCTGCATGAGGTTTATCATCCTATGGGGTACAGAATCACGGTGGATAACAAGTTGCTTGGGGTAAACCAGAGGATCATCGAGCAAGAGCTTGCAAATAAGAAACAAGACTACCTGATGGATGAGGGGCTTGCTCAGATTGTTAAACACTACGCATCAAATAAGGTTGCATTTAAGATAAAGTTGTTTCCAGGATCTTCACCAAAAGATGTGGCTTTAGAACAGGCCACAAAACTCAATGCAACTTGGGTGATACTTGACAGGCAAATGAAGAAAGATAAGGAGTTTTTCCTGGAGAAGCTTTCTTGTGGTATATCTATATTAAGGCATAACAATCGGATTGTTCGACTACGACCTATAGATCTCCCAGACGAAATACCATGTAACGGCCATGAAACATATGATGAAAGCTTACCAAGTGTTCCATATAAAGATCTTTTCAACGTTGATGTTTTCCCCAAGAGCACACTTGAAGTTGATGAGTTGAACCAGATACAAAGCAGGCCCTATGAGGAAGAGGGGTGCTCAAATATTACTACCAATACTAATGAAAAAACATGTCAGACAATGGATGGAACAGAAATAAATAGTAACCAAATGATTGACAAAATAGAAAGAGATGAGCAAGGCCAAGATCAAGAACAGTTGCAAAGCATGCCCCATGAGACAGAGGAGGACACAACAATTGTGATTAAAAATGATCAAACAACTGCTCGAGAAATAGGTGATCAACCGAACCAAGATGAAGAAAAGACAAACAACTTCCTCAATGGTGAGAGGTGGGACTTGAGGAATCCAGAAAAGAATGAAGAAATGATTAATCAACCAATAGATGATCTGCTGAGCCGGAATCAAGCACAGATGCTGAGCATATCCAATGGGGTTATATTGGATGGAGAGGAAGAGAAAATTATTTTGGAAAACTCAATGTCCACTTTCTGCTCTGTCTGCAAAACTAGACGACCAAATATTGGGTGGAAAAAGGAATTTAGTTATGAAGAACTCCAAGCAGCCACAGATGCATTTTCATTGAAGAATTGTCTCTCTGAAAGTGGATCTCTATTCACTTTCCAAGGCCAGATGGAGGGAGGGATGAAACTAGTGGTTAAGCAGCATGATGTAAGAAACACTCAAGTAAGGGAAAAAGTTAATTCAGGAATGCAAACCATCCTCAAAGCTAGACATAAGAATGTGATCATGCTATTTGGTTCATCTACAGCAGAATGTTTCCTGTTCACTGTATATGAGTATGCATGCAATGGTTCACTTGACAAGTATCTATCAAAAGAAGGCTCCAGACCATTGACTTGGATAGAAAGGAAAAGAGTCGCAATAGGCATTGCCAGAGGTCTTAAGTACCTACATGAAAATAACATTGTTCATTGCAATATAAAACCAAGCAATATTCTTCTAACACATGACTTCAAACCAATGATTGGAGATTTTGGCTATGGGAAAGAACTAGATTTGAAGTCCTACAAAAATAAAAACAAAGGGAATTGCGAATATGCAGCACCAGAATACCAGGAAAAGCGGAAATTTTCAACTAAGACAGATGTATACTCATTTGGTGTGGTTATTTTAGAGTTGATCACAGGGCGAAGGACTACAGATTTAATGTTGGAAGATAAATGCCTTGTTGAATGGGCAAAGCCTCTTCTTAAAAGAAAGAAGTACTCAGAGTTGGTGGATCCCATAATCAGAAACTCATACGAAGAGGAACACCTTCGTTGGCTGGTCCAAGTAACAACACAATGTCTAAAAAAGAATCCTAAGGAAAGATTATCAATGAATATGGTTGTTTCTGCATTACAAGGCATAGCAGAAAGTGAAACCTGCCACATGACAGAAGACATTACTCCAGCTATATCAGATTCAACAATTGTGCCAGACATAAATGGTTCACAAGGTCCAACAACAACAAAAGCTGATGAGCAAAGTCAGGAAGAGGAGAAAATCAAGAGCAGATTCCATGCGGAGGAAAAGAAGTTAAGACTAATAATTGAAAATAATCACTTTTACTCCGATAAACTTGGCCAGATTGAAGAACAGATGCAGAGAAGGCCCCAAGGGGAGGAGAAGAGCTCAGGAAAGTTGATAATCAATGACCGCATGATGGATCAGACAGTAGTTAATCAGCTGAGTGAGTTTGAAGAACAGATGCCAAGCACCTTCCATAGGGAAGGCATCACAACTCAGAAAATTAGTGTCAACCACATGATAAGTCCCACAAAAGGTGATCAGTTGAGCCAGGATCAAGAAGAGGAGATAAACTTTATTGAAATGAAAATAGGCTTAATACCAGAACCTATTAGTGGAATGATAGATCAAACAAAAGCAGATCAGCTGGTCCAGGATAAAACACAAACACAGCGGAGATGCCATGACGATTTACTGGATGAGCGTCAAGGTGAAATCATTTTGGAGAATTCAAAGTCCTCTGCATGCTCTATATGCAAAAGTAGGCGTCCGAACAATGCATGGACAAAAGACTTTAATTATGAAGAACTCCTAGAAGCTACAGAAGGATTTTCAATTGAGAACTCGTTATCAGAAAGAGAAGATGGACCTACTTTTGAAGGCTTGCTAGAGAGACAGGTAAAAATAGTTGTTAAGAAATATCAAGTTACTACATCCCACCAAGAGAAGATATTAAAATCAGAAGTACAGTTGTTCATCAGTGCTAGACATAAAAATGTGGTCATGTTGTTGGGTTTATGCACAAATAAAAGCCAACTGATGATTGTGTATGAGCAAGTATGCAACGGTTCACTTGAACAGTACCTAACAAGGGGAAGTTTCCAGTCATTGACTTGGAAGCAAAGGCTGAAAGTGGCAATGGGTACTGCCAGAGGTTTAAAGTACCTACATGGGAATAACATAATTCATGGAAATATAAAACCAAGTAACATTCTTCTAACACATGACTTCGAACCACGGATTGGAGATTTTGACTTTGGAAAAGTGAAACATGGACCAAAGAAATCCAGCAAAGATAAAAGTGTACGGAATTCTGGATATGCAGCACCTGAGTATGTTGAGAATGGAAAAGTATCAAATAAGACAGATGTGTACTCCTTTGGAGTGGTTCTTTTAGAGCTGATCAGTGGCCGGAGGGCTACAGACAAATTACCAGGTGGAAAAAGCCTTGTTGACTGGGCAAGGCCTCTACTGGGAGGAAAGAAGTACCCTAAGTTGGTGGATCTGAAAATCAGTAACTCCTATGAAGAAGAAAAACTTCTATGGTTGGTTCAAGTAACAGAACAATGTCTCAGAAAGAATCCTAAGGAAAGAATAACAATGAATATGGTTGTATCTTCATTACAAGGCATAGAAGAATCAGCTGAGTATTCTGTAATTGAAGACTCTCCTCCAGAAAACTCATGCTTACCACATGATGAGCCTGCCATGATTAGTACACAAGGTCAAATGAAAGCTGATCCAGTGAAGCAGGAGCAAGAATGGATTGGCAGAAACCAATATGAGGAGGAAAGAAGCCTAAGATTAACAGTCATAACCAATGACATAATAGGTCAGCGAAATGCAGATCAACTGATACAGGGTGGAGAAGATGTGCAGAGCAGCCCCCATGAAGAGATGTCCAGAGTAACAGTTATCAGCAATGACGTGATTGATGAGAAAAATTCTAACCAAAAAATCCAGGAAAAACTGCAGATTAAGGGAAGCTGTGATGAGGGTTTGAAGAATGCGAATGAAGCGAAAGTCATTTTGGAGAATTCGAAGTCTTCTGTATGCTCAATCTGTAGAAGTAGGCGTCCATACAGTGGATTGCAAAAGAAATATACTTATGAAGAACTTGAAGCTGCTACAGAAGGATTTTCAATAAAGTATTCTCTATGTGAAGGTGAATATGGACCTGCTTTCAGAGGCCAGCTAGAGAATAACCAAGAAATAGTTATTAAGCAACACACATTCACAAGCTTACAAGAACAGAAGGTCTTTATCTCAGAATTCCAATTGCTCATAAATGCCAGACATGAAAATGTGATCATGCTGTTGGGTTCGTGTATACGATTAAGTCAATTGCTAATTGTATACGAGAAGGCATGCAACGGTTCACTTGACCAGTACTTATCAAGGCAAAGTGCTACATCATTGACTTGGGGAGAAAGGGTGAAAGTTGCAATAGGTGTTGCCAGAGGTCTAAAGTATCTACATGAGAATAATATAGTACATGGAGGAATAAAACCTAGTAACATTCTTCTAAATCATGAGTTCAAACCAATGGTAGGAGATTTTGTGTTTGGAAAAGAAAGATGTGAATTGAAGAATGTCTGCAAGCAAAAAAGTATACGGAATTGTGGATACACTGCACCAGAGTGTCAGGAGAGTGAAGAATTATCAACTGAGGCAGATGTGTACTCTTTTGGTGTAGTTCTTGTAGAGTTGATTGCCGGCCGTATGATAGCAGATAAAATATTAGGACAGAAATGTCTTGTTGAATGTGTAAGGTCACTTCTTGGACGAAGAGAGTATCGACAGTTGGTGGATCCCAAAGTCAGAAGCTCCTATGATGAACAAGAACTTGTTTCATTGTTCCACATAACAGAAAATTGTCTGAAAAAGAATCCAAAGGAAAGATTCACAATGAATATGGTTGTCTCTGCACTGCCATGTGTAGCAAATAGCAATGGCCTCTATGTAAAGGAAGACTTTTCACCAGAAAACTCAAATGTTTCAGATGCAAAAAACTCAAAAGGTGAAGAGGAATCACTGAAAGAAAACAATTTAGGAACAGAGAATACTGAAGAGGTAAGGATGAATCACAGAGAAGGTGAGAAAGAGGAATCATTGGAGGAAGAAGATTTAGACACAGAGAATAGTGAAAAGGTAAGGAGGAATCACAAAGAAGGTGAGAAGGAGGAAACACTAGAAGAAGAAGAAGATTTAGGCACAGAGAATAGAGAAGAAAGAGTGGAACAAATAACTTGTAGTAGAGGCAATAATGAACCAGAAGTTAGTCAAGAGTGTGATACCTACACAAAGTGTGGTGAAATTAGTAAGAAAACAGAAGAAAAAGAAGGTTCTAGCACCAAGCTATGTCAAAAATGGGAAGGGTGCTTATCTTATGGTGGAGCTAGAAAATTTTATCACCAAGGGGCTCAAGAATACACAGCATGTAAAGAATTTTTCGGCTGGTGTGATTCCATTTGA 5301 0.3899 MATTAKNVVVIQDASKTLNLRVFYWIINGLSLKPEDVVTLVAILHEVYHPMGYRITVDNKLLGVNQRIIEQELANKKQDYLMDEGLAQIVKHYASNKVAFKIKLFPGSSPKDVALEQATKLNATWVILDRQMKKDKEFFLEKLSCGISILRHNNRIVRLRPIDLPDEIPCNGHETYDESLPSVPYKDLFNVDVFPKSTLEVDELNQIQSRPYEEEGCSNITTNTNEKTCQTMDGTEINSNQMIDKIERDEQGQDQEQLQSMPHETEEDTTIVIKNDQTTAREIGDQPNQDEEKTNNFLNGERWDLRNPEKNEEMINQPIDDLLSRNQAQMLSISNGVILDGEEEKIILENSMSTFCSVCKTRRPNIGWKKEFSYEELQAATDAFSLKNCLSESGSLFTFQGQMEGGMKLVVKQHDVRNTQVREKVNSGMQTILKARHKNVIMLFGSSTAECFLFTVYEYACNGSLDKYLSKEGSRPLTWIERKRVAIGIARGLKYLHENNIVHCNIKPSNILLTHDFKPMIGDFGYGKELDLKSYKNKNKGNCEYAAPEYQEKRKFSTKTDVYSFGVVILELITGRRTTDLMLEDKCLVEWAKPLLKRKKYSELVDPIIRNSYEEEHLRWLVQVTTQCLKKNPKERLSMNMVVSALQGIAESETCHMTEDITPAISDSTIVPDINGSQGPTTTKADEQSQEEEKIKSRFHAEEKKLRLIIENNHFYSDKLGQIEEQMQRRPQGEEKSSGKLIINDRMMDQTVVNQLSEFEEQMPSTFHREGITTQKISVNHMISPTKGDQLSQDQEEEINFIEMKIGLIPEPISGMIDQTKADQLVQDKTQTQRRCHDDLLDERQGEIILENSKSSACSICKSRRPNNAWTKDFNYEELLEATEGFSIENSLSEREDGPTFEGLLERQVKIVVKKYQVTTSHQEKILKSEVQLFISARHKNVVMLLGLCTNKSQLMIVYEQVCNGSLEQYLTRGSFQSLTWKQRLKVAMGTARGLKYLHGNNIIHGNIKPSNILLTHDFEPRIGDFDFGKVKHGPKKSSKDKSVRNSGYAAPEYVENGKVSNKTDVYSFGVVLLELISGRRATDKLPGGKSLVDWARPLLGGKKYPKLVDLKISNSYEEEKLLWLVQVTEQCLRKNPKERITMNMVVSSLQGIEESAEYSVIEDSPPENSCLPHDEPAMISTQGQMKADPVKQEQEWIGRNQYEEERSLRLTVITNDIIGQRNADQLIQGGEDVQSSPHEEMSRVTVISNDVIDEKNSNQKIQEKLQIKGSCDEGLKNANEAKVILENSKSSVCSICRSRRPYSGLQKKYTYEELEAATEGFSIKYSLCEGEYGPAFRGQLENNQEIVIKQHTFTSLQEQKVFISEFQLLINARHENVIMLLGSCIRLSQLLIVYEKACNGSLDQYLSRQSATSLTWGERVKVAIGVARGLKYLHENNIVHGGIKPSNILLNHEFKPMVGDFVFGKERCELKNVCKQKSIRNCGYTAPECQESEELSTEADVYSFGVVLVELIAGRMIADKILGQKCLVECVRSLLGRREYRQLVDPKVRSSYDEQELVSLFHITENCLKKNPKERFTMNMVVSALPCVANSNGLYVKEDFSPENSNVSDAKNSKGEEESLKENNLGTENTEEVRMNHREGEKEESLEEEDLDTENSEKVRRNHKEGEKEETLEEEEDLGTENREERVEQITCSRGNNEPEVSQECDTYTKCGEISKKTEEKEGSSTKLCQKWEGCLSYGGARKFYHQGAQEYTACKEFFGWCDSI* 1767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0353 1766 PANTHER OS01G0253100 PROTEIN 314 667 IPR045271 GO:0004714|GO:0006468
Gso20g0353 1766 PANTHER OS01G0253100 PROTEIN 1253 1607 IPR045271 GO:0004714|GO:0006468
Gso20g0353 1766 PANTHER OS01G0253100 PROTEIN 83 200 IPR045271 GO:0004714|GO:0006468
Gso20g0353 1766 PANTHER OS01G0253100 PROTEIN 648 1236 IPR045271 GO:0004714|GO:0006468
Gso20g0353 1766 Pfam Protein kinase domain 407 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g0353 1766 Gene3D Phosphorylase Kinase; domain 1 849 960 - -
Gso20g0353 1766 Gene3D Phosphorylase Kinase; domain 1 1283 1396 - -
Gso20g0353 1766 SUPERFAMILY Protein kinase-like (PK-like) 369 667 IPR011009 -
Gso20g0353 1766 Gene3D Phosphorylase Kinase; domain 1 357 459 - -
Gso20g0353 1766 MobiDBLite consensus disorder prediction 1654 1670 - -
Gso20g0353 1766 ProSiteProfiles Protein kinase domain profile. 886 1162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g0353 1766 MobiDBLite consensus disorder prediction 1601 1685 - -
Gso20g0353 1766 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 314 667 - -
Gso20g0353 1766 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 1253 1607 - -
Gso20g0353 1766 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 648 1236 - -
Gso20g0353 1766 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 83 200 - -
Gso20g0353 1766 Gene3D Transferase(Phosphotransferase) domain 1 461 668 - -
Gso20g0353 1766 Gene3D Transferase(Phosphotransferase) domain 1 962 1169 - -
Gso20g0353 1766 Gene3D Transferase(Phosphotransferase) domain 1 1399 1608 - -
Gso20g0353 1766 MobiDBLite consensus disorder prediction 249 271 - -
Gso20g0353 1766 ProSiteProfiles Protein kinase domain profile. 384 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g0353 1766 MobiDBLite consensus disorder prediction 667 696 - -
Gso20g0353 1766 ProSiteProfiles Protein kinase domain profile. 1322 1589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g0353 1766 MobiDBLite consensus disorder prediction 249 272 - -
Gso20g0353 1766 SUPERFAMILY Protein kinase-like (PK-like) 870 1156 IPR011009 -
Gso20g0353 1766 MobiDBLite consensus disorder prediction 667 685 - -
Gso20g0353 1766 SMART serkin_6 886 1148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g0353 1766 SMART serkin_6 1322 1589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g0353 1766 SMART serkin_6 384 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso20g0353 1766 MobiDBLite consensus disorder prediction 1611 1645 - -
Gso20g0353 1766 Pfam Protein tyrosine and serine/threonine kinase 1324 1586 IPR001245 GO:0004672|GO:0006468
Gso20g0353 1766 Pfam Protein tyrosine and serine/threonine kinase 901 1150 IPR001245 GO:0004672|GO:0006468
Gso20g0353 1766 SUPERFAMILY Protein kinase-like (PK-like) 1299 1585 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0353 Gso-Chr20 8753154 8772150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0353 372 652 Trihelix Transcription Factor Family AT5G38560 37.415 3.22e-52 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Gso20g0353 PK_Tyr_Ser-Thr 4.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0353 - - gsj:114401847 3490.66