Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0344 ATGTCCACCATCACGGCTTCTTACAATGTGACTCCGAATGAGCCAACTCCAAACGTTTCTTTGTGGCTTTCCGAGAGTGACCAAGTTGCACGTTGGAGTCACACCTCCACCATCTACATTTACAAAGAAAACCAAACCCAAAACGCCCTTGAGAGAATGAGGGATTCTCTAAGCAAAATTCTTGTGCACTACCACCCTTTGGCCGGTCGATTGACTTGGTTAGAGGGTGGTAAAGTAGAACTGAATTGCAATGGAAAGGGAGTGACATTGATTGAAGCCGAATCACAAAAAACAATGGATGATTATGGCGATTTTGCGCCGAGCGAAAAGCTGAAGAATGAACTCATTCCTCCGGTTGATTACTCTCAACCCATTGAGGAGCTTCCCTTGTTGCTTGTTCAATTAACAAGGTTCAAAAAAGGAAGCAGCAACAATAATAATAATAACCAATTAGGCCTTGCAATTGGAGTGGCTTTTTGCCATGTTTTGTGTGATGGGTTAGCAGCCATAAGGTTCATTAATGCATGGGCAAAGCTTACTAGAGGGGAAGTGTTGGACTCAATTGAAATGTTTCCGTTTCTTGATAGAACAATCATGAATTCCACATACCCACCAAGGGCTCCACGTTTTGATCACCCTGAGTTGAAGCCTCTGCCTCTCAAACTAGGCACCACTGACACCATAGAAGAACAGAAAAAGGAGAAAACTGCTGTGATTTTGAGACTCACTTCACAGCAAGTGGAGAAATTGAAGAAGAAAACCAATGATGAACGACCTCAAAAAGAAGGTATTACAAAAACGTTACGACCATATAGTAGATACGAAGTTATTGCATCACACATATGGAGATGTGCATCAAAGGCACGTGAGCTAGAAGATCTTCAACCAACCGTGGTAAGGGTAAGTGCGGACATTCGCAATAGGCTAAACCCTCCCCTCCCAAGAAACTACTTTGGCAACGCATTGGCCGTGGCATTGACACCAAAATGTCACACTAAGGAACTCATAACAAACCCATTAAGCCACGGTGCCCAAAAGATTAGGGAAGCAATTGAGTTGCTAAATGATGAGTACATAAGGTCACAATTGGACTTCATTAGGTGCCATGAGCAATTGGATAGGATAAGGGCCTCGTATTTGGACCAAGGGGAGCCAAAAAATGCACCCTTTTATGGAAACCCTAATCTCACTATTGTGAGTTGGATGAGCATGCCCGTTTATGAGGCTGATTTTGGGTGGGGGAAGCCGGGGTATTTTGGTCCTGGTGCTGTGTACCCTGATGGAAAGGCTTACATTATTCGAAGCTCGGATGAGGATGGCTCACTCGTTGTGTCGGCTCACTTGCAAACAGCACACAAGGAGCTTTTCAAAAAGTTCTTCTATGAGGACATATGA 1395 0.4394 MSTITASYNVTPNEPTPNVSLWLSESDQVARWSHTSTIYIYKENQTQNALERMRDSLSKILVHYHPLAGRLTWLEGGKVELNCNGKGVTLIEAESQKTMDDYGDFAPSEKLKNELIPPVDYSQPIEELPLLLVQLTRFKKGSSNNNNNNQLGLAIGVAFCHVLCDGLAAIRFINAWAKLTRGEVLDSIEMFPFLDRTIMNSTYPPRAPRFDHPELKPLPLKLGTTDTIEEQKKEKTAVILRLTSQQVEKLKKKTNDERPQKEGITKTLRPYSRYEVIASHIWRCASKARELEDLQPTVVRVSADIRNRLNPPLPRNYFGNALAVALTPKCHTKELITNPLSHGAQKIREAIELLNDEYIRSQLDFIRCHEQLDRIRASYLDQGEPKNAPFYGNPNLTIVSWMSMPVYEADFGWGKPGYFGPGAVYPDGKAYIIRSSDEDGSLVVSAHLQTAHKELFKKFFYEDI* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0344 464 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 464 - -
Gso20g0344 464 Pfam Transferase family 3 461 - -
Gso20g0344 464 Gene3D - 3 217 IPR023213 -
Gso20g0344 464 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 3 464 - -
Gso20g0344 464 Gene3D - 223 462 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0344 Gso-Chr20 8510109 8512571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0344 4 462 Monolignol Biosynthesis Gene Families AT5G48930 36.876 3.23e-99 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0344 K13065 - gmx:100787038 922.924