Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0339 ATGAATTTGATCAATCAAACAATCTTCTCTTCAGCCACGTTCGCGTATGACATTCCTCTAAAGAGACATGAGATCTACAACGTGTGCATGAATCAGCCAATGAAGATAATATCTGATGGCATATGGACTCCAGAAAATGGAGCAATACCTTCAGAATCTGCATTCACAGTGCTTGAGCTACAAATAGTTACCATTTTTGTCGTCACGCAAGGCTTTCATTTCATTCTCAAGCGATTAGGGATCCCTTATTTCGTTTCACAAGTAATGGCTGGTTTTCTTCTAGGTCCATCAATTCCCACAGGACCCTTCGAAAAGTACAAGAAGATGCTATTCCCCTTCGGAAGTCCAGACATCCTTAACACGTTGACAGGGTTAGGGTACTCATTCTATCTCTTCATAAACTCAGTTCAAATGGACCTAAGCTTGATAACGAAGACGGGGAAGAAGGGTTGGGTCATTGCAGTTTCCTCCTACGGTATTTCCATATTTGTTGGCTTTATCATGTTGATTTTCTTCCTTCCGACATGGCAAGAGCTCCTCAACGAAGACGTTTCCTCCGTCCTACCCGTGGTCATCATCTCTCAAAGCGGTTGTTCCTTCGCTGTCATCTCATCCTTGCTCAATGACCTCGGAATCCTTAACTCGGAACTCGGACGCCTTGCACTCTCCATAGCTTTCATCACCGATCTCGCAGGTGGAATCGGGGCAGGATTTGGCGCCGACTTTCTGAAAAGCCTAAATTTGGATTTTTCTATCCGTCTTACAAACATGGTGGCATTTTTCATTTACCTAATCTTCGCTCCACTACTTGGGCGTCCAGCAATGAGATGGGTTGTGAAGAACACCCCAGAAGGCAAACCCGTGTCTAAGACTTATATCTATGCCATCGTAGTGTTGTTTTTGGGATTAGGTTTCTTTGCAGGGTATTTCAACCAACCCTTCTTGGTAGGAGCAGTTATATTAGGGCTTGCTGTTCCTGAAGGCCCTCCTTTGGGGTCTGAATTCGTTTCCCAACTTGAGTTGTTCTCCAACTGGTTCTTGACTTCGATTTTCGTCACGTGTAGCACCATGAAGGTCGATCTCAAACAATGTGACTCTCTCTCCTTCGTTATGGTCATATGCTTCTTCGTTATAATGGTCTACTTGATTAAGTTGGTGGTGTGCATGGGAATTTGCCGCTATTGCAAAATGCCCTTCACTGATGGCTTCTGCCTTGCTCTCATTTTGAGCTGCAAAGGTGTTGTTGATATATGCTCCTATGTCCTGGTCTACGATACAATGTCACAAAATAAAGGTACAATAGCTGTTACGATCATCTCAGTGTTGCTTATGGGAACAACTTCGAGGCTTGGTGTGAAGGCATTGTATGACCCTTCAAGGAAATACGCAGGGTACCAAAAAAGGAACATTATGACCTTGAAAAACAACCATGAGCTTAGGGTTGTTGCGTGCATCCACAAGCCATTCCACATGAATCACATAAAAAATATGCTCCAACTTTGTTCCCCTGCACCAGAGAACACACTAGTGGCAGATATTGTGCATGTAATGGAGCTAGTAGGAAGGTCCAATCCAATTTTCATAGCACACAAACTTCAGCACAAAGTGGGGTCCTCCCACAACTACTCTGGGGAACTAATTGTGGCCTTTGATCTTTTTGAACGTGACTATGCTGGTTTTGCCACTGCCAACACCTACACTGCCATATCCCCAACAACCCTAATGCACGAAGATGTTTGTTACCTTGCTTTGGACAAAAATGCAGCCCTAATAGTCCTTCCATTTCATGTGAAATGGGGAGGGGATGGGTCAATTGAGTCAGAAGATAGCAACATTAGAGCACTTAATTCCAAGGTTTTGGAAAGGGCACCTTGCTCAATTGGGATTCTTGTGAACCGTGGCAATTGTGGGTTCAGCTCAAAAAGTTACAAGGTTGCCATGATTTTCTTGGGTGGACCTGATGATAGAGAGGCCTTGTGCTTGGCTAAGAGGTTTTTGAAAAACCCTGAGAATCAGTTGTTTGTGTATAGGTTGCTAGCACATGACCACAATATCTCGGATTGGGAACACATGATTGATAATGAGGAGTTGAGGGAGGTGCGTGGAGCTTATTTTAAACTAGAAAATGTGACATATGAAGAGAGGACTGTAGAAGATGCATCCGAGACAACATGTTTCATCAAAGATATAGCGAACAAATTTGATTTTATTGTAGTTGGGAGACGCAATGGGGTCAAAACTTCCCAGACATTTGGGCTGGAAAATTGGACTGAATATTCGGAGTTAGGGGTTGTTGGTGATTTGCTTGCTTCACCGGATATGGAGACTAGGGCTTCAATTTTGGTTGTGCAACAACAACAGTCAATCGAGAACTGGTTGTGTCAAAACCAGATGAGGGATTGGAGAAGAGTCTCACAATGTTGGTGTAGGATTTGGGATTTAGGGAAGAAAAGGAGGCATAACGCAGAGAGAATCAAATTTTTTTTGCAGGACTTGGAAGCAGCGGTAGTTCCAGAAGAAGAACCTCGATCTTCCGAGGCATCTTCTAGTTTTCCTGTTGCAGGGCATTCTCATACTGAAATTGTTGAAGAATCGATCATGGCTGAAGAGCCAAGAAAAGTAACCCTGGAGGATTGTCAAGTTCGACTGTGCCACAATTCTTTACCAGTATCGCACAACCAGAGGCTGGCAGGTGTGCTTGCAGATGCAATCAGGTTGAGTTTGTTTTCATTTTCTTTGGCTGGAGAAGCTAAGAGATGGCTTCATTCTTTTAAGGGAAATAGTGTGAAGTCATGGGATGAAATTGTAGAAAAGTTCTTAAAGAAATATTTCCCTGAATCAAAGACTGTAGAAGGTAAAGCTGCCATCTCTTCCTTCCACCAGTTTCTAGATGAATTGTTGAGTGAGGCACTTGAAAGATTCAGAGGTTTATTGCAGAAGAATCTCACTCACAGTTTTTTAGAACCAATACAACTCAATATCTTTATAGATGGGTTAAGACCACAATCTAAGCATCTCTTGGATGCTTCAGCTGGGGGTAAGATCAAGATGAAGACCCCTGAGAAAGCAATGGACTTAATTGAAAACATGGCTGCTAGTGACATTGCCATTTTGAGAGACTGA 3123 0.4307 MNLINQTIFSSATFAYDIPLKRHEIYNVCMNQPMKIISDGIWTPENGAIPSESAFTVLELQIVTIFVVTQGFHFILKRLGIPYFVSQVMAGFLLGPSIPTGPFEKYKKMLFPFGSPDILNTLTGLGYSFYLFINSVQMDLSLITKTGKKGWVIAVSSYGISIFVGFIMLIFFLPTWQELLNEDVSSVLPVVIISQSGCSFAVISSLLNDLGILNSELGRLALSIAFITDLAGGIGAGFGADFLKSLNLDFSIRLTNMVAFFIYLIFAPLLGRPAMRWVVKNTPEGKPVSKTYIYAIVVLFLGLGFFAGYFNQPFLVGAVILGLAVPEGPPLGSEFVSQLELFSNWFLTSIFVTCSTMKVDLKQCDSLSFVMVICFFVIMVYLIKLVVCMGICRYCKMPFTDGFCLALILSCKGVVDICSYVLVYDTMSQNKGTIAVTIISVLLMGTTSRLGVKALYDPSRKYAGYQKRNIMTLKNNHELRVVACIHKPFHMNHIKNMLQLCSPAPENTLVADIVHVMELVGRSNPIFIAHKLQHKVGSSHNYSGELIVAFDLFERDYAGFATANTYTAISPTTLMHEDVCYLALDKNAALIVLPFHVKWGGDGSIESEDSNIRALNSKVLERAPCSIGILVNRGNCGFSSKSYKVAMIFLGGPDDREALCLAKRFLKNPENQLFVYRLLAHDHNISDWEHMIDNEELREVRGAYFKLENVTYEERTVEDASETTCFIKDIANKFDFIVVGRRNGVKTSQTFGLENWTEYSELGVVGDLLASPDMETRASILVVQQQQSIENWLCQNQMRDWRRVSQCWCRIWDLGKKRRHNAERIKFFLQDLEAAVVPEEEPRSSEASSSFPVAGHSHTEIVEESIMAEEPRKVTLEDCQVRLCHNSLPVSHNQRLAGVLADAIRLSLFSFSLAGEAKRWLHSFKGNSVKSWDEIVEKFLKKYFPESKTVEGKAAISSFHQFLDELLSEALERFRGLLQKNLTHSFLEPIQLNIFIDGLRPQSKHLLDASAGGKIKMKTPEKAMDLIENMAASDIAILRD* 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0339 1040 Pfam Sodium/hydrogen exchanger family 64 444 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso20g0339 1040 Pfam Retrotransposon gag protein 907 1001 IPR005162 -
Gso20g0339 1040 PANTHER CATION/H + ANTIPORTER 14 789 - -
Gso20g0339 1040 PANTHER CATION/H+ EXCHANGER 2 14 789 - -
Gso20g0339 1040 Gene3D - 57 463 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0339 Gso-Chr20 8401622 8413628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0339 28 783 Antiporter Super Family AT3G44900 35.500 1.22e-148 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0339 - - gsj:114401839 2036.54