Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0336 ATGGCGTTGTTGAGCTGCTGGAATTCTTCAGGAGGCAGCGAGGAAGAGCTGTGGGACATCCATGGTGCTGATCCAAAGTATTGCTTGATGGTGACACCGGCTCCAGTAGCACAGACACTTCCAGGGACCAGCAAGGTGGCACCTAAGCATACCTCCGCCATCAATGCAGGGGCTACCGCCGAAAATTTGGTAGCTGAGCTTCTTGACACAAGGGAGCTTGTTGTAGTGGTTCGGGGAATCATTAAGAATGTGGGCACTCTTTCTGGGCCATTCTTGAAAATGGGTTGTATCTTAGGCCTCAGAGTCTCTCCTACTTACAGGAGAAAAAGGGTTGCACTAAGACTTGTGACCGCAACTGAAGAATGGATGGTGAGAAATGGAGTTGAGTATGCATTGTTAGCCACTGAAAATAACAATGATGCGTCTAAAAACCTATTCACCATCAAATCCAACTATGTGAATCTCAGCTCACTTGTCATATTTGTCCAACCAACTAGTTCCCTTACAAAGAAAATTTCCATGGATATAAAAATAGACAAAGTGGACATAGATCTAGCAATTTCGTTGTACAAAAGAACCATGAGGACCAAAGATTTGTATCCATTGGACATGGATGTTATTCTGAAGGAGAAACTCAACTTAAGAACATGGGTATGCTACTACAAAGAAGAGGGATGA 678 0.4395 MALLSCWNSSGGSEEELWDIHGADPKYCLMVTPAPVAQTLPGTSKVAPKHTSAINAGATAENLVAELLDTRELVVVVRGIIKNVGTLSGPFLKMGCILGLRVSPTYRRKRVALRLVTATEEWMVRNGVEYALLATENNNDASKNLFTIKSNYVNLSSLVIFVQPTSSLTKKISMDIKIDKVDIDLAISLYKRTMRTKDLYPLDMDVILKEKLNLRTWVCYYKEEG* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0336 225 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 63 225 - -
Gso20g0336 225 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 89 146 IPR016181 -
Gso20g0336 225 CDD NAT_SF 73 133 - -
Gso20g0336 225 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE ISOFORM X1-RELATED 63 225 - -
Gso20g0336 225 Pfam Acetyltransferase (GNAT) family 73 147 IPR000182 GO:0016407
Gso20g0336 225 Gene3D - 34 160 - -
Gso20g0336 225 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 37 213 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0336 Gso-Chr20 8273965 8280698 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso20g0336 Acetyltransf_1 3.6e-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0336 - - gsj:114401836 447.588