Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0328 ATGGTTAAGGTCTGGAAGCCATGGTGTGTTTTGATTTCTGTGCTGCATTTGTTCCTCCACACCACATCTTCTGATTTCATCGTCAAGAATCTACCAGGTTTTGGGGATCTTCCGTTCACATTGAATACTGGATACATTGGTGTTGGACAAAGAGAAGAGGTGCAGTTATATTATTACTTTGTTGAATCTCAAAGGAGTCCTTTGAATGATCCTCTTCTACTTTGGCTTGTTGGAGGTCCTGGTTGCTCTGCCCATTCTGCTTTCTTCTATGAAAATGGGCCATTAATGTTTAATTTTCACGATTTTAATGGGAGTTTTCCACAGCTTCTATTGAATCCGCACACTTGGACAAAGGTACTCAACATATTATATGTGGATGCACCTGTTGGTACGGGATATTCTTACTCTAAAACACAAGAAGGCTATTATAGCAATGACGAACAATTGGTGGAACACATGTATGATTTTTTCCATAAGTGGCTGGTGGATCACCCTGAATTCAGATCGAATCCACTTTACATTGGTGGTGGTTCTTATTCTGGCATAGTTGTTCTTCCCCTGGTTCAGAAAGTATACGAAGATTATGAAACTGGACGCTCACCAATCCTGAACATCCAAGGCCTTGTGCTTGCAAGTCCAAGACTTGACTCTTTCATGGACAATAACACAAAAGTTGAATTCGCTCACCAACGAACACTTATATCAAATGAACTATACGAGTCAATTAAATCTAATTGCAATGGTGATTATGTTAATCTTGATCCTAACAACACAAAATGTATGTCAGATTATGAAGCCTACACTGAGTTAGTTCGTTACATAAATGAATATCAAATTTTGGAACCAAGTTGTGTGATTGCACCTAAGGAGAATCAAAGAATTCTTTCTCAAGAATTAAATTATATCCACCAAACTAAATTTAGGTGTCGGGATGACTTATATGCAATTGGAGAATTATGGGCAAATGATCCACATGTTCAGAAGGCTCTTCAAGTTAGAGAGGGAACAAAAGATCACTTCCAACGATGCAATCGCAGCGCTGCATATACATGGAACGTTCCTAGTGTGGTTCAATACCTTCATAATCTTACAAACACAAACATGCGATCTCTAATTTATTGCACGGATCTTGACATGTCGATACCGTATCTTAGTTCACTTTCTATTGTCAAGTCACTTAATTTGAAATTTGATATGACTTGGCATCCATGGTTCGTTGATGGTCAAGTGGCAGGATATGCCGAGGAATACAAAAAAAGTGAGTATCACCTAACTTACGCCATTGTGAAGGGTGCAGGTCATGTGGCGCAAGAGAGTAAGCCTAAGGAGGTATATGAGATGATTGACAGATGGTTGTCATTTTTTTATATATGA 1374 0.3872 MVKVWKPWCVLISVLHLFLHTTSSDFIVKNLPGFGDLPFTLNTGYIGVGQREEVQLYYYFVESQRSPLNDPLLLWLVGGPGCSAHSAFFYENGPLMFNFHDFNGSFPQLLLNPHTWTKVLNILYVDAPVGTGYSYSKTQEGYYSNDEQLVEHMYDFFHKWLVDHPEFRSNPLYIGGGSYSGIVVLPLVQKVYEDYETGRSPILNIQGLVLASPRLDSFMDNNTKVEFAHQRTLISNELYESIKSNCNGDYVNLDPNNTKCMSDYEAYTELVRYINEYQILEPSCVIAPKENQRILSQELNYIHQTKFRCRDDLYAIGELWANDPHVQKALQVREGTKDHFQRCNRSAAYTWNVPSVVQYLHNLTNTNMRSLIYCTDLDMSIPYLSSLSIVKSLNLKFDMTWHPWFVDGQVAGYAEEYKKSEYHLTYAIVKGAGHVAQESKPKEVYEMIDRWLSFFYI* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0328 457 Gene3D - 309 454 - -
Gso20g0328 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Gso20g0328 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Gso20g0328 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Gso20g0328 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 424 437 IPR001563 GO:0004185|GO:0006508
Gso20g0328 457 Pfam Serine carboxypeptidase 36 453 IPR001563 GO:0004185|GO:0006508
Gso20g0328 457 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 10-RELATED 10 455 - -
Gso20g0328 457 Gene3D alpha/beta hydrolase 24 286 IPR029058 -
Gso20g0328 457 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 10 455 IPR001563 GO:0004185|GO:0006508
Gso20g0328 457 SUPERFAMILY alpha/beta-Hydrolases 28 453 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0328 Gso-Chr20 7826584 7865382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0328 307 453 Calmodulin-binding Proteins AT2G22960 38.095 9.04e-29 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0328 K16296 - gmx:100791997 867.84