Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0324 ATGGCAGAAATCGCAGTGTCATCCGCACTAGACAAATTACTTCCACTAATAGCAGATGAAGCAAATCTGCTACGGGGCATCTCCAAAGAATTCGCAGACATAAAAAAAGAACTAGAATACATTCAAGCTTTCCTCAAGGATGCAGATAGAAAGGCAGCAGCAGAAGGAGACAACACAGACGATAGAATCAAAATATGGGTGAAAGAGTTGAGGGAAGCATCTTTTTCCATAGAAGATGTCATCGATGAATACATGATCCTTGTGGAACAACAGCCTCGTGATCCTGGATGTGCAACTTCACTCTGTAAGGTCATTCACTTTATTAAAACATTGATGCCTCGTCGTCAAATATCATCAAAGATTAAGCAGGCCAAGTCATCAGTTCATGGAATCAAGCAAAGAGGTGTGGATTATCACTTCCTAATCCATTCTTCTCTTCAACTAGGACCAAGCAGATACAGAGGTAGCCATAATAATGTCCAATGGCATGACCCTCGAATGCATTTCCGTTACCTTGACGAAGCTGAAGTTGTTGGCCTTGAAGACACAAGAGATGAATTGATTGGTTGGTTAGTGGAGGGACCGGCAGAGCGAACTGTCATCTCTGTGGTAGGAATGGGAGGACTCGGAAAAACCACTCTTGCTGGCAGAGTTTTCAACAACCAGAAGGTGATTTCACACTTTGATTACCACGCATGGATCACGGTGTCCCAATCCTACACTGTGGAAGGGTTGATGAGGAACTTGCTGAAGAACTTATGCAAAGAAAAAATGGGGGATCTTCTTGAAGGTATTTCTGAAATGGATCGAGATTCATTGATTGATGAAGTGAGAAACCATTTGAAACAAAAGAGGTACGTTGTCATTTTTGATGATGTATGGAGTGTAGAACTTTGGGGTCAAATTGAAAATGCCATGTTTGATAATAACAATGGAAGTAGAATATTAGTCACAACTAGGATGGAAGGTGTTGTAAACTCTTGTAAGAAATCTCCTTCTGATCAGGTGCATAAGCTGGAACCTTTGACTAAACAAGAATCTATGGAACTTTTTTGCAAAATGGCATTTCGATGTCACAATAATGGACGTTGTCCAGAAGAACTCAAGAAAATTTCTACAGACTTTGTTGAAAAATGTAAGGGCTTACCATTGGCAATTGTAGCTATTGCCAGTCTTTTATCTGGCAAAGAAAAGACTCCATTTGAATGGGAAAAGATTAGGCGAAGCCTGAGTTCAGAGATGGACAAAAATCCACATTTAATTGGTATAGCAAAGATTTTAGGTTTTAGTTATGATGATTTGCCACACTACCTAAAATCATGCTTATTGTATTTTGGAGTATATCCTGAGAACTATGAAGTTAAATCGAAAAGATTATTTCGACAATGGATAGCTGAAGGATTTGTAAAAGATGAAGAAGGAAAAACTTTAGAGGACGTTGCAGAACAATATTTAACAGAGTTAATTGGTACAAATTTAGTGCAAGTCTCTTCATTCACCACAGATGGCAAAGCTAAGAGTTGTCGTGTTCATGACTTAATACATGATATGATCCTTAGAAAATTCAAGGATTTAAGTTTTTGCCAGCATATCAGTAAAAAAGATGAGTCGATGTCAAGTGGGATGGTTAGGCGCTTGTCAATAGAAACAATTTCCAATGATTTAATGGGGAGCTCTAAAAGCTTACATGCCAGGTCATTGCTCATTTTTGCAGATGAAAATGAAGCATGGAATACCAACTTTGTGCAAAGAATTCCTACAAAATACAAGCTACTGAAGGTATTTGATTTTGAAGATGGTCCATCGCATTATATCTCTATTCATGAAAATTGGGGAAATCTCGCACACTTGAAGTATTTAAACTTAAGAAATTCAAATATGCCAAGTCTGAAATTCATTGGCAAACTCCAGAACCTCGAGACCTTGGACATAAGGAATACATCTATCAAGAAATTGCCAAAGGAGATTCGCAAGCTAAGAAAGCTACGACATCTTTTGGGTGATGATATGAAATTGTTTCAATTGAAGAATTGTCTCGGAGGCCTGACATCCCTACAAACGTTGCGTCATGTAAAGCTAACTATGGAGAATGATGATGGAGTAGAGTTAATAAGAGAATTGGGAAAGCTGAAGCAGTTAAGAAACTTTTGCTTGACTGGTGTCAGAGAAGAACAGGGAAGCGCTCTATGTTCCTCAATAAGTGAGATGACAAACTTGGAGAAACTACGTATCGAGTCATACGGAGTTCAAGTCATTGATTTGCCTTATATTTCATCTTTGCCTATGCTTCGGAAGCTTAGCCTATTTGGGAAGCTAAAAAAGCTTCCAGAGTGGGTTCCACAACTCCAAAATCTCGTAAAATTATCTTTGGAATACTCAGAGTTAACCAATGATCCATTGAAATCACTACAAAATATGCCATATTTGTTGTTCCTCGGCATGTACAAGGCTTATAAAGGAGAAAGTTTGTATTTTGAAGATGGAGGATTTCAACAACTAAGGGAACTGTCTCTTGGAGGATTGCGTAACTTGGAATCCATCATTATCGATAAAGGAGCACTCCATTCTCTGAAAAAGCTCAAATTTTGGGGAATACGCAAACTCAAGAAAGTACCTCCTGGCATTCAACACTTGAAAAAACTGGAAGTTCTTGATATCCGTAATATGCCATATGAATTCAATGAGTGCATTGCTCCCGATGGGGGACCAGAGCACCCAATCATCCAGCATGTGGGCCTTGTTGAAATTACTACTGACTTCGCACAAACTCGCATTATTTCTCACTTATCAACGCATTAA 2799 0.3876 MAEIAVSSALDKLLPLIADEANLLRGISKEFADIKKELEYIQAFLKDADRKAAAEGDNTDDRIKIWVKELREASFSIEDVIDEYMILVEQQPRDPGCATSLCKVIHFIKTLMPRRQISSKIKQAKSSVHGIKQRGVDYHFLIHSSLQLGPSRYRGSHNNVQWHDPRMHFRYLDEAEVVGLEDTRDELIGWLVEGPAERTVISVVGMGGLGKTTLAGRVFNNQKVISHFDYHAWITVSQSYTVEGLMRNLLKNLCKEKMGDLLEGISEMDRDSLIDEVRNHLKQKRYVVIFDDVWSVELWGQIENAMFDNNNGSRILVTTRMEGVVNSCKKSPSDQVHKLEPLTKQESMELFCKMAFRCHNNGRCPEELKKISTDFVEKCKGLPLAIVAIASLLSGKEKTPFEWEKIRRSLSSEMDKNPHLIGIAKILGFSYDDLPHYLKSCLLYFGVYPENYEVKSKRLFRQWIAEGFVKDEEGKTLEDVAEQYLTELIGTNLVQVSSFTTDGKAKSCRVHDLIHDMILRKFKDLSFCQHISKKDESMSSGMVRRLSIETISNDLMGSSKSLHARSLLIFADENEAWNTNFVQRIPTKYKLLKVFDFEDGPSHYISIHENWGNLAHLKYLNLRNSNMPSLKFIGKLQNLETLDIRNTSIKKLPKEIRKLRKLRHLLGDDMKLFQLKNCLGGLTSLQTLRHVKLTMENDDGVELIRELGKLKQLRNFCLTGVREEQGSALCSSISEMTNLEKLRIESYGVQVIDLPYISSLPMLRKLSLFGKLKKLPEWVPQLQNLVKLSLEYSELTNDPLKSLQNMPYLLFLGMYKAYKGESLYFEDGGFQQLRELSLGGLRNLESIIIDKGALHSLKKLKFWGIRKLKKVPPGIQHLKKLEVLDIRNMPYEFNECIAPDGGPEHPIIQHVGLVEITTDFAQTRIISHLSTH* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0324 932 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 445 IPR027417 -
Gso20g0324 932 PRINTS Disease resistance protein signature 200 215 - -
Gso20g0324 932 PRINTS Disease resistance protein signature 280 294 - -
Gso20g0324 932 PRINTS Disease resistance protein signature 379 393 - -
Gso20g0324 932 PRINTS Disease resistance protein signature 634 650 - -
Gso20g0324 932 PANTHER DISEASE RESISTANCE PROTEIN RP 16 886 IPR044974 GO:0006952
Gso20g0324 932 SUPERFAMILY L domain-like 509 894 - -
Gso20g0324 932 Gene3D - 4 118 - -
Gso20g0324 932 Gene3D - 341 430 IPR042197 -
Gso20g0324 932 Pfam NB-ARC domain 181 432 IPR002182 GO:0043531
Gso20g0324 932 Pfam Rx N-terminal domain 5 94 IPR041118 -
Gso20g0324 932 Gene3D - 431 522 IPR036388 -
Gso20g0324 932 Gene3D Ribonuclease Inhibitor 560 901 IPR032675 -
Gso20g0324 932 CDD RX-CC_like 2 132 IPR038005 -
Gso20g0324 932 Gene3D - 171 335 IPR027417 -
Gso20g0324 932 PANTHER - 16 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0324 Gso-Chr20 7637435 7646254 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0324 176 400 WRKY Transcription Factor Family AT5G45050 24.779 4.52e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0324 K13457 - gmx:100789363 1853.57