Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0323 ATGGCGGAAATGGCAGTGTCCTTCGCACGAGACAAATTGCTTCCACTACTAAGCGACGAAGCAAAACTGCTTTGGAACATCCCCAAAGAATTTGAAGACATACAAAATGAACTAGAATACATTCAAGGCTCCCTGGAGAAGGCAGATAGAATGGCTGCAGAAGAAGGAGACAACGCAAACAAGGGAATCAAAAAATGGGTGAAGGACTTGAGGGAAGCATCTTTCCGAATAGAAGATGTCATTGATGAACACATTATGTATGTGGAACACCAGCCTCATGATGCTCTTGGTTGTGCAGCTTTACTCTTTGAGTGCAATATCACTCACTTCATTGAATCTTTGAGGCGTCGTCATCAAATAGCATCAGAGATTCAGCAGATTAAGTCATTTGTTCAAGGAATCAAGCAAAGAGGTATTGATTATGACTACCTAATCAAACCTTCTCTTGAGCACGGATCAAGCAGCTACAGAGGGAGCCAAAGTGTCCAATGGCATGACCCTCGATTGGCTTCACGTTACCTTGACGAAGCCGAAGTTGTTGGCCTTGAAGACCCTAAAGATGAATTGATAACTTGGTTAGTGGAAGGACCAGCAGAGCGCACCATCATCTTTGTGGTAGGAATGGGAGGGCTAGGAAAAACAACTGTTGCCGGAAGAGTCTTCAATAACCAGAAGGTGATTGCACACTTTGATTGCCATGCATGGATCACAGTGTCTCAATCCTACACTGTGGAAGGGTTGCTAAGAGACTTGTTGAAGAAGTTATGCAAAGAAAAGAAGGTGGATCCTCCTCATGATATTTCTGAAATGAATCGAGATTCACTGATTGATGAAGTGAGAAGCCATTTGCAACGAAAGAGGTATGTTGTCATTTTTGATGATGTATGGAGTGTAGAACTTTGGGGTCAAATTGAAAATGCGATGCTTGATACTAAAAATGGTTGTAGAATATTAATCACAACTAGGATGGATGGTGTTGTAGACTCTTGTATGAAATATCCTTCGGATAAGGTGCATAAGCTGAAACCTTTGACTCAAGAAGAATCTATGCAACTCTTTTGCAAGAAGGCATTCCGATACCACAATAATGGGCATTGTCCAGAAGATCTTAAGAAAATTTCTTCTGACTTTGTTGAAAAATGTAAGGGTTTACCATTGGCAATTGTGGCTATTGGTAGTCTTTTATCTGGCAAAGAAAAGACTCCATTTGAATGGGAAAAAATTAGGCGAAGCCTAAGTTCAGAGATGAACAAAAATCCCCATTTAATTGGCATAACAAAGATTTTAGGTTTCAGTTATGATGATTTGCCATATTATCTGAAATCATGCTTATTGTATTTTGGTGTATATCCCGAAGACTATGAAGTTAACTCAAAAAGATTAATTTGGCAATGGATAGCTGAAGGATTTGTAAAAGAGGAAGAAGGAAAAACTTTAGAGGACACTGCACAACAATATTTATCAGAGTTGATTAGCAGAGGTTTAGTGCAAGTCTCTTCATTTACCTTTGATGGCAAAGCTAAGAGTTGTCGTGTTCATGACTTGCTACGCGATATGATCCTTAGAAAATCCAAGGATTTAAGTTTTTGCAAGCATATCAGTAAAGAAGATGAGTCGATGCCAAGTGGGATGATTCGGCGCTTGTCAGTAGAAACTTTTTCCAATGGTTTAACGGGGAATACTAAAAGCTTACACACACGGTCACTGCATGTTTTTGCACAGAAAGAAGAAGAGTTAACCAACAACTTTGTGCAAGAAATCCCTACAAAATACAGGCTATTGAAGATACTTGATTTTGAAGGTGATCTAACATTGCCTGGAATTTTTGTTCCTGAAAATTGGGAAAATCTAGCTCACTTGAAGTATTTAAACATAAGACATTTAGCCATGAAAACTGAACAACTTCCAAAATACATCTGTAATCTCCGCAACCTGGAGACCCTGGACATAAGGGAAACAAATGTCAGCAAATTGCCAAAGGAGTTTTGCAAGCTAAAAAAGCTACGACATCTTTTAGGTGATAACTTGGATTTGTTTCAATTGAAGAATGGTCTCGGAGGTTTAACATCCCTACAAACGCTTTGTGATGTATCGATCCCTGTGGATGATAATGACAATGGAGTAGAGTTAATAAGAGAACTGGGAAAGTTGAAGCAACTAAGGAACTTAAGCTTGGATGGTGTCAAGGAAGAACAGGGAAGCATTCTATGTTTCTCATTAAATGAGATGACAAACCTGGAGAAACTAAATATTTGGTCAGAGGATGAAGATGAAGTCATTGATTTGCCTACTATTTCATCTCTGCCTATGCTTCGGAAGCTTTGCCTTGTAGGGAAGTTAAGAAAAATTCCAGAGTGGGTTCCACAACTCCAAAATCTTGTCAAATTAACATTGGAAAATTGCAAGTTAACTGATGATCCATTCAAATCATTACAAAATATGCCACATTTGTTGTTCCTCGACGTGTACTATGGTGCTTATGAAGGTGAAAGTTTGAATTTTGAAGATGGGGGATTTCAGCAACTAAGGAAACTATCTCTCCGAGGCATGTTGAACTTGAAATCCATCATTATCGATAAAGGAGCACTTCATTCTTTGGAAAATCTCCTATTTTGGAACATACCCCAACTCAAGACAGTACCTCCCGGTATTCAACACTTGGAAAAACTGCAACTTCTCGAAATTTACAATATGGCAGATGAATTCTACGAGTGCATTGCTCCCGATGGAGGACCATTGCTTCCAATCGTCCAGCATCCATCCCTCGTAAAATTTTTGTAA 2781 0.3916 MAEMAVSFARDKLLPLLSDEAKLLWNIPKEFEDIQNELEYIQGSLEKADRMAAEEGDNANKGIKKWVKDLREASFRIEDVIDEHIMYVEHQPHDALGCAALLFECNITHFIESLRRRHQIASEIQQIKSFVQGIKQRGIDYDYLIKPSLEHGSSSYRGSQSVQWHDPRLASRYLDEAEVVGLEDPKDELITWLVEGPAERTIIFVVGMGGLGKTTVAGRVFNNQKVIAHFDCHAWITVSQSYTVEGLLRDLLKKLCKEKKVDPPHDISEMNRDSLIDEVRSHLQRKRYVVIFDDVWSVELWGQIENAMLDTKNGCRILITTRMDGVVDSCMKYPSDKVHKLKPLTQEESMQLFCKKAFRYHNNGHCPEDLKKISSDFVEKCKGLPLAIVAIGSLLSGKEKTPFEWEKIRRSLSSEMNKNPHLIGITKILGFSYDDLPYYLKSCLLYFGVYPEDYEVNSKRLIWQWIAEGFVKEEEGKTLEDTAQQYLSELISRGLVQVSSFTFDGKAKSCRVHDLLRDMILRKSKDLSFCKHISKEDESMPSGMIRRLSVETFSNGLTGNTKSLHTRSLHVFAQKEEELTNNFVQEIPTKYRLLKILDFEGDLTLPGIFVPENWENLAHLKYLNIRHLAMKTEQLPKYICNLRNLETLDIRETNVSKLPKEFCKLKKLRHLLGDNLDLFQLKNGLGGLTSLQTLCDVSIPVDDNDNGVELIRELGKLKQLRNLSLDGVKEEQGSILCFSLNEMTNLEKLNIWSEDEDEVIDLPTISSLPMLRKLCLVGKLRKIPEWVPQLQNLVKLTLENCKLTDDPFKSLQNMPHLLFLDVYYGAYEGESLNFEDGGFQQLRKLSLRGMLNLKSIIIDKGALHSLENLLFWNIPQLKTVPPGIQHLEKLQLLEIYNMADEFYECIAPDGGPLLPIVQHPSLVKFL* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0323 926 Gene3D - 343 432 IPR042197 -
Gso20g0323 926 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 447 IPR027417 -
Gso20g0323 926 PANTHER - 30 875 - -
Gso20g0323 926 Gene3D - 168 334 IPR027417 -
Gso20g0323 926 Gene3D Ribonuclease Inhibitor 558 908 IPR032675 -
Gso20g0323 926 Gene3D - 4 121 - -
Gso20g0323 926 PRINTS Disease resistance protein signature 202 217 - -
Gso20g0323 926 PRINTS Disease resistance protein signature 282 296 - -
Gso20g0323 926 PRINTS Disease resistance protein signature 381 395 - -
Gso20g0323 926 PRINTS Disease resistance protein signature 640 656 - -
Gso20g0323 926 Gene3D - 433 524 IPR036388 -
Gso20g0323 926 SUPERFAMILY L domain-like 511 898 - -
Gso20g0323 926 Pfam NB-ARC domain 183 434 IPR002182 GO:0043531
Gso20g0323 926 CDD RX-CC_like 2 135 IPR038005 -
Gso20g0323 926 Coils Coil 922 926 - -
Gso20g0323 926 PANTHER DISEASE RESISTANCE PROTEIN RP 30 875 IPR044974 GO:0006952
Gso20g0323 926 Pfam Rx N-terminal domain 5 92 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0323 Gso-Chr20 7603191 7607006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0323 178 402 WRKY Transcription Factor Family AT5G45050 23.111 4.64e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0323 K13457 - gmx:100787762 1856.65