Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso20g0304 ATGGCCCAACTCAGTGAGCCATTTCTGAGGCTCGTGATTATTAATGTGAACTTAGGTAGGGACATCATAAAGCCCATTCTTGAAATTGCTCACCGAGGTCACGTCAACCTCACAGTCCTTAGCACTTCTGGCACAGTGACCAAGGTGACCCTTCATAACTCACTCCATGGCGATGTTGCCTTAACACTCCATGGGCCCTTCACCTTGCTCTCCCTCAACAACTCATACTTATTCAACAACCACTACAACCTTAACTACAGAGTTACCCTTCCCCTTCCTTTATCCTTCAGGATCAATCTCTCCAACTCTCGAGGCCAAGTCACTAGTGGTGCCATTGGCAACTAA 345 0.4725 MAQLSEPFLRLVIINVNLGRDIIKPILEIAHRGHVNLTVLSTSGTVTKVTLHNSLHGDVALTLHGPFTLLSLNNSYLFNNHYNLNYRVTLPLPLSFRINLSNSRGQVTSGAIGN* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso20g0304 114 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 4 113 IPR014476 GO:0003680
Gso20g0304 114 SUPERFAMILY AF0104/ALDC/Ptd012-like 9 112 - -
Gso20g0304 114 Gene3D - 8 114 - -
Gso20g0304 114 Pfam Plants and Prokaryotes Conserved (PCC) domain 11 112 IPR005175 -
Gso20g0304 114 ProSiteProfiles PPC domain profile profile. 6 114 IPR005175 -
Gso20g0304 114 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 4 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso20g0304 Gso-Chr20 6416880 6417224 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso20g0304 13 113 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 32.673 8.88e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso20g0304 - - gsj:114401824 213.772